Evidence map›Paper›PMID 37047603›Full record

ArticleInternational journal of molecular sciences2023

The Anticancer Drug Daunomycin Directly Affects Gene Expression and DNA Structure.

Takashi Nishio, Yohji Shimada, Yuko Yoshikawa, Takahiro Kenmotsu, Helmut Schiessel, Kenichi Yoshikawa

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Takashi NishioFaculty of Life and Medical Sciences, Doshisha University, Kyoto 610-0394, Japan.ORCID 0000-0001-8761-1776
Yohji ShimadaFaculty of Life and Medical Sciences, Doshisha University, Kyoto 610-0394, Japan.
Yuko YoshikawaFaculty of Life and Medical Sciences, Doshisha University, Kyoto 610-0394, Japan.
Takahiro KenmotsuFaculty of Life and Medical Sciences, Doshisha University, Kyoto 610-0394, Japan.
Helmut SchiesselCluster of Excellence Physics of Life, TU Dresden, 01307 Dresden, Germany.
Kenichi YoshikawaFaculty of Life and Medical Sciences, Doshisha University, Kyoto 610-0394, Japan.ORCID 0000-0002-2751-7136
Doshisha University · JPTechnische Universität Dresden · DE

Funding

Deutsche Forschungsgemeinschaft EXC 2068-390729961Japan Science and Technology Agency JPMJSP2129Japan Society for the Promotion of Science JP20H01877Japan Society for the Promotion of Science JP20H05934Japan Society for the Promotion of Science JP22K20640Uehara Memorial Foundation Overseas postdoctoral fellowships
6 · The paper itself

Abstract

Daunomycin (DM), an anthracycline antibiotic, is frequently used to treat various cancers, but the direct effects of DM on gene expression and DNA structure are unclear. We used an in vitro cell-free system, optimized with spermine (SP), to study the effect of DM on gene expression. A bimodal effect of DM on gene expression, weak promotion followed by inhibition, was observed with increasing concentration of DM. We also performed atomic force microscopy observation to measure how DM affects the higher-order structure of DNA induced with SP. DM destroyed SP-induced flower-like conformations of DNA by generating double-strand breaks, and this destructive conformational change of DNA corresponded to the inhibitory effect on gene expression. Interestingly, the weakly enhanced cell-free gene expression occurred as DNA conformations were elongated or relaxed at lower DM concentrations. We expect these newly unveiled DM effects on gene expression and the higher-order structure of DNA will contribute further to the development and refinement of useful anticancer therapy chemicals.

Indexed as

DaunorubicinDNAAntibiotics, AntineoplasticGene ExpressionNucleic Acid ConformationSpermineAntibiotics, AntineoplasticDaunorubicinDNASpermineanticancer drugatomic force microscopy (AFM)cell-free in vitro luciferase assaydaunomycindouble-strand breaks (DSBs)gene expressionhigher-order structure of DNApolyamine

Identifiers

PMID37047603
PMCPMC10095590
OpenAlexW4362581697

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.