Evidence map›Paper›PMID 37047222›Full record

ArticleInternational journal of molecular sciences2023

Integrating AI/ML Models for Patient Stratification Leveraging Omics Dataset and Clinical Biomarkers from COVID-19 Patients: A Promising Approach to Personalized Medicine.

Babatunde Bello, Yogesh N Bundey, Roshan Bhave, Maksim Khotimchenko, Szczepan W Baran, Kaushik Chakravarty, Jyotika Varshney

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

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  10. 50 shades of AI in regulatory science.Drug discovery today · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Babatunde BelloVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.
Yogesh N BundeyVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.
Roshan BhaveVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.
Maksim KhotimchenkoVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.ORCID 0000-0001-8440-9927
Szczepan W BaranVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.ORCID 0000-0002-9318-9310
Kaushik ChakravartyVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.ORCID 0000-0002-0067-7332
Jyotika VarshneyVeriSIM Life Inc., 1 Sansome Street, Suite 3500, San Francisco, CA 94104, USA.ORCID 0000-0003-0275-1521

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The COVID-19 pandemic has presented an unprecedented challenge to the healthcare system. Identifying the genomics and clinical biomarkers for effective patient stratification and management is critical to controlling the spread of the disease. Omics datasets provide a wealth of information that can aid in understanding the underlying molecular mechanisms of COVID-19 and identifying potential biomarkers for patient stratification. Artificial intelligence (AI) and machine learning (ML) algorithms have been increasingly used to analyze large-scale omics and clinical datasets for patient stratification. In this manuscript, we demonstrate the recent advances and predictive accuracies in AI- and ML-based patient stratification modeling linking omics and clinical biomarker datasets, focusing on COVID-19 patients. Our ML model not only demonstrates that clinical features are enough of an indicator of COVID-19 severity and survival, but also infers what clinical features are more impactful, which makes our approach a useful guide for clinicians for prioritization best-fit therapeutics for a given cohort of patients. Moreover, with weighted gene network analysis, we are able to provide insights into gene networks that have a significant association with COVID-19 severity and clinical features. Finally, we have demonstrated the importance of clinical biomarkers in identifying high-risk patients and predicting disease progression.

Indexed as

Artificial IntelligenceCOVID-19BiomarkersHumansMachine LearningPandemicsPrecision MedicineBiomarkersartificial intelligenceCOVID-19omicspatient stratificationrisk managementSARS-CoV-2

Identifiers

PMID37047222
PMCPMC10094615

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.