Evidence map›Paper›PMID 37044098›Full record

ArticleMolecular cell2023

The APE2 nuclease is essential for DNA double-strand break repair by microhomology-mediated end joining.

Hubert Fleury, Myles K MacEachern, Clara M Stiefel, Roopesh Anand, Colin Sempeck, Benjamin Nebenfuehr, Kelper Maurer-Alcalá, Kerri Ball, Bruce Proctor, Ondrej Belan and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 40 citations in OpenAlex.

  1. DNA Repair Mechanisms.Methods in molecular biology (Clifton, N.J.) · 2027
    Review
  2. Article
  3. Article
  4. Telomere Crisis Shapes Cancer Evolution.Cold Spring Harbor perspectives in biology · 2026
    Review
  5. Article
  6. The role of HMGA1 in genome stability: Implications in human cancer.Cellular and molecular life sciences : CMLS · 2026
    Review
  7. Article
  8. Dynamic Assemblies in Genome Maintenance.Advances in experimental medicine and biology · 2026
    Review
  9. Review
  10. Review
  11. Article
  12. Coordinated transfer of DNA between Pol θ and Pol δ resets microhomology choice during double-strand break repair.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Disruption of Microhomology-mediated End-joining in Ewing Sarcoma.bioRxiv : the preprint server for biology · 2025
    Article
  14. Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Hubert FleuryDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Myles K MacEachernDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Clara M StiefelDepartment of Radiation Oncology, University of Texas Health Science Center, San Antonio, TX, USA.
Roopesh AnandDSB Repair Metabolism Laboratory, The Francis Crick Institute, London, UK.
Colin SempeckDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Benjamin NebenfuehrDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Kelper Maurer-AlcaláDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Kerri BallDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Bruce ProctorDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Ondrej BelanDSB Repair Metabolism Laboratory, The Francis Crick Institute, London, UK.
Erin TaylorDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Raquel OrtegaDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Benjamin DoddDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Laila WeatherlyDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Djelika DansokoDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA.
Justin W LeungDepartment of Radiation Oncology, University of Texas Health Science Center, San Antonio, TX, USA.
Simon J BoultonDSB Repair Metabolism Laboratory, The Francis Crick Institute, London, UK; Artios Pharma Ltd, Babraham Research Campus, Cambridge CB22 3FH, UK.
Nausica ArnoultDepartment of Molecular, Cellular & Developmental Biology, University of Colorado Boulder, Boulder, CO, USA. Electronic address: nausica.arnoult@colorado.edu.
University of Colorado Boulder · USThe Francis Crick Institute · GBThe University of Texas Health Science Center at San Antonio · US

Funding

TRAINING IN SIGNAL TRANSDUCTION &CELL CYCLE REGULATIONT32GM008759 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI AHN, NATALIE G. · 2000 to 2020
$5.9M
Predoctoral Training Program in Signaling and Cellular Regulation INCLUDE Down Syndrome SupplementT32GM142607 · NIGMS · UNIVERSITY OF COLORADO · PI Sabrina Leigh Spencer, Tin Tin Su · 2021 to 2026
$3.6M
Deciphering the chromatin-based DNA damage response pathwayR35GM137798 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Justin Wai Chung Leung · 2020 to 2026
$2.4M
Deciphering the role of heterochromatin in telomere function and maintenance mechanismsR35GM143108 · NIGMS · UNIVERSITY OF COLORADO · PI ARNOULT, NAUSICA C. · 2021 to 2025
$1.9M
Deciphering the function of the APE2 nuclease during repair by alternative end-joining and its role in HR-deficient cellsR01CA266100 · NCI · UNIVERSITY OF COLORADO · PI Nausica C. Arnoult · 2022 to 2026
$1.7M
Mechanistic characterization of the cell cycle-dependent DNA repair pathway- ResubmissionR01CA244261 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI Justin Wai Chung Leung · 2021 to 2026
$1.5M
NCI NIH HHS R01 CA244261NCI NIH HHS R01 CA266100NIGMS NIH HHS R35 GM137798NIGMS NIH HHS R35 GM143108NIGMS NIH HHS T32 GM008759NIGMS NIH HHS T32 GM142607Wellcome Trust
6 · The paper itself

Abstract

Microhomology-mediated end joining (MMEJ) is an intrinsically mutagenic pathway of DNA double-strand break (DSB) repair essential for proliferation of homologous recombination (HR)-deficient tumors. Although targeting MMEJ has emerged as a powerful strategy to eliminate HR-deficient (HRD) cancers, this is limited by an incomplete understanding of the mechanism and factors required for MMEJ repair. Here, we identify the APE2 nuclease as an MMEJ effector. We show that loss of APE2 inhibits MMEJ at deprotected telomeres and at intra-chromosomal DSBs and is epistatic with Pol Theta for MMEJ activity. Mechanistically, we demonstrate that APE2 possesses intrinsic flap-cleaving activity, that its MMEJ function in cells depends on its nuclease activity, and further identify an uncharacterized domain required for its recruitment to DSBs. We conclude that this previously unappreciated role of APE2 in MMEJ contributes to the addiction of HRD cells to APE2, which could be exploited in the treatment of cancer.

Indexed as

DNA Breaks, Double-StrandedDNA RepairDNADNA End-Joining RepairHomologous RecombinationDNAAPE2APEX2cancerDNA repairHomologous RecombinationHR-deficientMMEJPARPsynthetic lethality

Identifiers

PMID37044098
PMCPMC10164096
OpenAlexW4364361542

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.