Evidence map›Paper›PMID 37043748›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2023

From benchmark to bedside: transfer learning from social media to patient-provider text messages for suicide risk prediction.

Hannah A Burkhardt, Xiruo Ding, Amanda Kerbrat, Katherine Anne Comtois, Trevor Cohen

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Loss function influence on hyperparameter optimization for observational healthcare prediction models.Journal of the American Medical Informatics Association : JAMIA · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Informatics and data science approaches address significant public health problems.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hannah A BurkhardtDepartment of Biomedical Informatics and Medical Education, University of Washington, Seattle, Washington, USA.ORCID 0000-0002-9386-5569
Xiruo DingDepartment of Biomedical Informatics and Medical Education, University of Washington, Seattle, Washington, USA.
Amanda KerbratDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, Washington, USA.
Katherine Anne ComtoisDepartment of Psychiatry and Behavioral Sciences, University of Washington, Seattle, Washington, USA.
Trevor CohenDepartment of Biomedical Informatics and Medical Education, University of Washington, Seattle, Washington, USA.

Funding

University of Washington Biomedical Informatics and Data Science Research Training ProgramT15LM007442 · NLM · UNIVERSITY OF WASHINGTON · PI JOHN H. GENNARI, Andrea L. Hartzler · 2002 to 2026
$19.6M
NLM NIH HHS T15 LM007442
6 · The paper itself

Abstract

objectiveCompared to natural language processing research investigating suicide risk prediction with social media (SM) data, research utilizing data from clinical settings are scarce. However, the utility of models trained on SM data in text from clinical settings remains unclear. In addition, commonly used performance metrics do not directly translate to operational value in a real-world deployment. The objectives of this study were to evaluate the utility of SM-derived training data for suicide risk prediction in a clinical setting and to develop a metric of the clinical utility of automated triage of patient messages for suicide risk. MATERIALS AND

methodsUsing clinical data, we developed a Bidirectional Encoder Representations from Transformers-based suicide risk detection model to identify messages indicating potential suicide risk. We used both annotated and unlabeled suicide-related SM posts for multi-stage transfer learning, leveraging customized contemporary learning rate schedules. We also developed a novel metric estimating predictive models' potential to reduce follow-up delays with patients in distress and used it to assess model utility.

resultsMulti-stage transfer learning from SM data outperformed baseline approaches by traditional classification performance metrics, improving performance from 0.734 to a best F1 score of 0.797. Using this approach for automated triage could reduce response times by 15 minutes per urgent message. DISCUSSION: Despite differences in data characteristics and distribution, publicly available SM data benefit clinical suicide risk prediction when used in conjunction with contemporary transfer learning techniques. Estimates of time saved due to automated triage indicate the potential for the practical impact of such models when deployed as part of established suicide prevention interventions.

conclusionsThis work demonstrates a pathway for leveraging publicly available SM data toward improving risk assessment, paving the way for better clinical care and improved clinical outcomes.

Indexed as

Social MediaSuicideText MessagingBenchmarkingHumansMachine Learningartificial intelligencecomputer assisteddecision-makingdelivery of health carenatural language processingsocial mediasuicide prevention

Identifiers

PMID37043748
PMCPMC10198538

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.