Evidence map›Paper›PMID 37043428›Full record

ArticlePLoS biology2023

A D-2-hydroxyglutarate dehydrogenase mutant reveals a critical role for ketone body metabolism in Caenorhabditis elegans development.

Olga Ponomarova, Hefei Zhang, Xuhang Li, Shivani Nanda, Thomas B Leland, Bennett W Fox, Alyxandra N Starbard, Gabrielle E Giese, Frank C Schroeder, L Safak Yilmaz and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Quantifying Embryonic Lethality Rate in Caenorhabditis elegans.Journal of visualized experiments : JoVE · 2026
    Article
  2. Article
  3. Shared urinary metabolomic signatures as potential biomarkers for early intestinalCurrent research in parasitology & vector-borne diseases · 2026
    Article
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  9. Phytochemical-richFrontiers in nutrition · 2025
    Article
  10. Life science alliance · 2024
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Olga PonomarovaDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Hefei ZhangDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Xuhang LiDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Shivani NandaDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Thomas B LelandDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Bennett W FoxBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, United States of America.
Alyxandra N StarbardDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Gabrielle E GieseDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Frank C SchroederBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, New York, United States of America.
L Safak YilmazDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.
Albertha J M WalhoutDepartment of Systems Biology, University of Massachusetts Chan Medical School, Worcester, Massachusetts, United States of America.ORCID 0000-0001-5587-3608
University of Massachusetts Chan Medical School · USCornell University · US

Funding

Transcription networks in C elegans organogenesisR01DK068429 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI A. J. Marian Walhout · 2005 to 2026
$10.9M
Gene regulatory and metabolic network structure, function and evolutionR35GM122502 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI A. J. Marian Walhout · 2017 to 2026
$8.3M
Large scale nutrigenetics and genomics in a tractable metazoan modelR01DK115690 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ANDERSEN, ERIK CHRISTIAN, SCHROEDER, FRANK CLEMENS · 2017 to 2020
$2.8M
Gene Regulatory Networks in Development and PhysiologyR56DK068429 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI WALHOUT, A. J. MARIAN · 2018 to 2018
$671k
NIDDK NIH HHS R01 DK068429NIDDK NIH HHS R01 DK115690NIDDK NIH HHS R56 DK068429NIGMS NIH HHS R35 GM122502
6 · The paper itself

Abstract

In humans, mutations in D-2-hydroxyglutarate (D-2HG) dehydrogenase (D2HGDH) result in D-2HG accumulation, delayed development, seizures, and ataxia. While the mechanisms of 2HG-associated diseases have been studied extensively, the endogenous metabolism of D-2HG remains unclear in any organism. Here, we find that, in Caenorhabditis elegans, D-2HG is produced in the propionate shunt, which is transcriptionally activated when flux through the canonical, vitamin B12-dependent propionate breakdown pathway is perturbed. Loss of the D2HGDH ortholog, dhgd-1, results in embryonic lethality, mitochondrial defects, and the up-regulation of ketone body metabolism genes. Viability can be rescued by RNAi of hphd-1, which encodes the enzyme that produces D-2HG or by supplementing either vitamin B12 or the ketone bodies 3-hydroxybutyrate (3HB) and acetoacetate (AA). Altogether, our findings support a model in which C. elegans relies on ketone bodies for energy when vitamin B12 levels are low and in which a loss of dhgd-1 causes lethality by limiting ketone body production.

Indexed as

Caenorhabditis elegansPropionatesAlcohol OxidoreductasesAnimalsGlutaratesHumansKetonesVitamin B 122-hydroxyglutarate dehydrogenaseAlcohol Oxidoreductasesalpha-hydroxyglutarateGlutaratesKetonesPropionatesVitamin B 12

Identifiers

PMID37043428
PMCPMC10096224
OpenAlexW4365135827

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.