Evidence map›Paper›PMID 37043016›Full record

ArticleArchives of virology2023

Identification and management of tomato brown rugose fruit virus in greenhouses in Mexico.

Pablo Vargas-Mejía, Gustavo Rodríguez-Gómez, Daniel A Salas-Aranda, Irving J García-López, Ruth S Pérez-Alfaro, Emmanuel Ávila de Dios, J Natzul Santoyo-Villa, Ricardo I Alcalá Briseño, Laura Silva-Rosales

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Pablo Vargas-MejíaLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.ORCID http://orcid.org/0000-0002-0360-1894
Gustavo Rodríguez-GómezLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.ORCID http://orcid.org/0000-0002-6458-8558
Daniel A Salas-ArandaLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.
Irving J García-LópezLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.
Ruth S Pérez-AlfaroLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.
Emmanuel Ávila de DiosLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.ORCID http://orcid.org/0000-0001-7914-0927
J Natzul Santoyo-VillaLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico.ORCID http://orcid.org/0000-0002-9646-3290
Ricardo I Alcalá BriseñoBotany and Plant Pathology, Oregon State University, Corvallis, OR, USA.ORCID http://orcid.org/0000-0002-7031-2195
Laura Silva-RosalesLaboratorio de Interacciones Planta-Virus, Departamento de Ingeniería Genética, Centro de Investigaciones y de Estudios Avanzados, Unidad Irapuato Libramiento Norte Carretera Irapuato-León, 36824, Irapuato, Gto, Mexico. laura.silvar@cinvestav.mx.ORCID http://orcid.org/0000-0001-6679-5131
Instituto Tecnológico Superior de Irapuato · MXOregon State University · US

Funding

Cinvestav IP-1995Cinvestav IP-231Cinvestav IP-240
6 · The paper itself

Abstract

Tomato brown rugose fruit virus (ToBRFV) has become a cause of great concern in the global tomato agro-industry since its first report in Israel in 2014. Global tomato production is affected by ToBRFV, and management practices are being evaluated. We tested seed lots from international producers as well as greenhouse substrates and water wells as possible sources of virus contamination. We identified a second introduction of ToBRFV in Mexico by a strain closely resembling isolates from the Netherlands and the Middle East. ToBRFV was detected by RT-PCR in seed coats and epicotyls (from commercial seeds and seedlings obtained from infected tomato plants), indicating a transmission rate of 9%. Virus-like particles (VLPs) were found in wells used for irrigation in greenhouses, but these exhibited low infectivity. These findings suggest that water sources could serve as ToBRFV reservoirs. We evaluated four chemical and six thermal methods for sanitizing substrates, plasticware, and other greenhouse utensils, using detached leaf bioassays in Nicotiana rugosa. The most effective chemical sanitization method was treatment with glutaraldehyde plus quaternary ammonium salts and pentapotassium salts. The most effective heat treatment was at 92°C for 30 minutes, which inactivated the virus. Tomato producers could implement these sanitization methods to control ToBRFV.

Indexed as

FruitSolanum lycopersicumBiological AssayMexicoSaltsSalts

Identifiers

PMID37043016
OpenAlexW4365135697

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.