Evidence map›Paper›PMID 37040620›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2023

An NLP approach to identify SDoH-related circumstance and suicide crisis from death investigation narratives.

Song Wang, Yifang Dang, Zhaoyi Sun, Ying Ding, Jyotishman Pathak, Cui Tao, Yunyu Xiao, Yifan Peng

Abstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Comparing LLM and Fine-Tuned Model Performance on NVDRS Circumstance Extraction with Varying Prompt Complexity.Proceedings. IEEE International Conference on Healthcare Informatics · 2026
    Article
  3. SDoH-GPT: using large language models to extract social determinants of health.Journal of the American Medical Informatics Association : JAMIA · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Analyzing Social Factors to Enhance Suicide Prevention Across Population Groups.Proceedings. IEEE International Conference on Healthcare Informatics · 2024
    Article
  11. Article
  12. Advancements in extracting social determinants of health information from narrative text.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Song WangCockrell School of Engineering, The University of Texas at Austin, Austin, Texas, USA.ORCID 0000-0002-8224-0424
Yifang DangSchool of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, Texas, USA.ORCID 0000-0002-4014-2957
Zhaoyi SunPopulation Health Sciences, Weill Cornell Medicine, New York, New York, USA.
Ying DingSchool of Information, The University of Texas at Austin, Austin, Texas, USA.
Jyotishman PathakPopulation Health Sciences, Weill Cornell Medicine, New York, New York, USA.
Cui TaoSchool of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, Texas, USA.
Yunyu XiaoPopulation Health Sciences, Weill Cornell Medicine, New York, New York, USA.
Yifan PengPopulation Health Sciences, Weill Cornell Medicine, New York, New York, USA.ORCID 0000-0001-9309-8331

Funding

Utilization of health services after engagement with opioid use disorder (OUD) treatment provider by individuals with and without post-traumatic stress disorderP30DA040500 · NIDA · WEILL MEDICAL COLL OF CORNELL UNIV · PI Yuhua Bao · 2015 to 2026
$20.7M
Dynamic learning for post-vaccine event prediction using temporal information in VAERSR01AI130460 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI CHEN, YONG, TAO, CUI · 2017 to 2021
$3.4M
Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language ProcessingRF1AG072799 · NIA · YALE UNIVERSITY · PI LIU, HONGFANG, TAO, CUI · 2021 to 2021
$2.4M
Facilitate Observational Studies of Alzheimer's Disease and Alzheimer's Disease-Related Dementias Using Ontology and Natural Language ProcessingR01AG072799 · NIA · YALE UNIVERSITY · PI HONGFANG LIU, Cui Tao · 2025 to 2026
$1.7M
A framework to enhance radiology structured report by invoking NLP and DL: Models and ApplicationsR00LM013001 · NLM · WEILL MEDICAL COLL OF CORNELL UNIV · PI PENG, YIFAN · 2020 to 2022
$710k
NIAID NIH HHS R01 AI130460NIA NIH HHS R01 AG072799NIA NIH HHS RF1 AG072799NIDA NIH HHS P30 DA040500NLM NIH HHS R00 LM013001
6 · The paper itself

Abstract

objectivesSuicide presents a major public health challenge worldwide, affecting people across the lifespan. While previous studies revealed strong associations between Social Determinants of Health (SDoH) and suicide deaths, existing evidence is limited by the reliance on structured data. To resolve this, we aim to adapt a suicide-specific SDoH ontology (Suicide-SDoHO) and use natural language processing (NLP) to effectively identify individual-level SDoH-related social risks from death investigation narratives. MATERIALS AND

methodsWe used the latest National Violent Death Report System (NVDRS), which contains 267 804 victim suicide data from 2003 to 2019. After adapting the Suicide-SDoHO, we developed a transformer-based model to identify SDoH-related circumstances and crises in death investigation narratives. We applied our model retrospectively to annotate narratives whose crisis variables were not coded in NVDRS. The crisis rates were calculated as the percentage of the group's total suicide population with the crisis present.

resultsThe Suicide-SDoHO contains 57 fine-grained circumstances in a hierarchical structure. Our classifier achieves AUCs of 0.966 and 0.942 for classifying circumstances and crises, respectively. Through the crisis trend analysis, we observed that not everyone is equally affected by SDoH-related social risks. For the economic stability crisis, our result showed a significant increase in crisis rate in 2007-2009, parallel with the Great Recession.

conclusionsThis is the first study curating a Suicide-SDoHO using death investigation narratives. We showcased that our model can effectively classify SDoH-related social risks through NLP approaches. We hope our study will facilitate the understanding of suicide crises and inform effective prevention strategies.

Indexed as

HomicideSuicideCause of DeathHumansNatural Language ProcessingPopulation SurveillanceRetrospective StudiesSocial Determinants of HealthViolencenatural language processingsocial determinants of healthsocial riskssuicide

Identifiers

PMID37040620
PMCPMC10354765

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.