Evidence map›Paper›PMID 37040226›Full record

ArticleThe Indian journal of medical research2023

Molecular characterization & recombination analysis of complete enterovirus-88 isolated from acute flaccid paralysis cases in India.

Ashok Munivenkatappa, Dimpal A Nyayanit, Sreelekshmy Mohandas, Asia Luwang, Anita Shete, H Hanumaiah, Devendra T Mourya, Pragya D Yadav

Open access · diamondAbstract read
In one paragraph

Article in The Indian journal of medical research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Ashok MunivenkatappaBangalore Unit, ICMR-National Institute of Virology, Bengaluru, Karnataka, India.
Dimpal A NyayanitMaximum Containment Laboratory, ICMR-National Institute of Virology, Maximum Containment Facility, Pune, Maharashtra, India.
Sreelekshmy MohandasMaximum Containment Laboratory, ICMR-National Institute of Virology, Maximum Containment Facility, Pune, Maharashtra, India.
Asia LuwangBangalore Unit, ICMR-National Institute of Virology, Bengaluru, Karnataka, India.
Anita SheteMaximum Containment Laboratory, ICMR-National Institute of Virology, Maximum Containment Facility, Pune, Maharashtra, India.
H HanumaiahBangalore Unit, ICMR-National Institute of Virology, Bengaluru, Karnataka, India.
Devendra T MouryaMaximum Containment Laboratory, ICMR-National Institute of Virology, Maximum Containment Facility, Pune, Maharashtra, India.
Pragya D YadavMaximum Containment Laboratory, ICMR-National Institute of Virology, Maximum Containment Facility, Pune, Maharashtra, India.
ICMR-National Institute of Virology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background & objectives: Focus on non-polio enteroviruses (NPEVs) causing acute flaccid paralysis (AFP) due to myelitis has increased with the containment of the poliovirus. Enterovirus-B88 (EV-B88) has been associated with the AFP cases in Bangladesh, Ghana, South Africa, Thailand and India. In India, EV-B88 infection was linked to AFP a decade ago; however, to date, no complete genome has been made available. In this study, the complete genome sequence of EV-B88 was identified and reported from two different States (Bihar and Uttar Pradesh) in India using the next-generation sequencing technique. Methods: Virus isolation was performed on the three AFP suspected cases as per the WHO-recommended protocol. Samples showing cytopathic effects in the human Rhabdocarcinoma were labelled as NPEVs. Next-generation sequencing was performed on these NPEVs to identify the aetiological agent. The contiguous sequences (contigs) generated were identified, and reference-based mapping was performed. Results: EV-B88 sequences retrieved in our study were found to be 83 per cent similar to the EV-B88 isolate from Bangladesh in 2001 (strain: BAN01-10398; Accession number: AY843306.1). Recombination analyses of these samples demonstrate recombination events with sequences from echovirus-18 and echovirus-30. Interpretation & conclusions: Recombination events in the EV-B serotypes are known, and this work reconfirms the same for EV-B88 isolates also. This study is a step in increasing the awareness about EV-B88 in India and emphasizes future studies to be conducted in the identification of other types of EV present in India.

Indexed as

EnterovirusEnterovirus InfectionsMyelitisalpha-FetoproteinsCentral Nervous System Viral DiseasesHumansIndiaNeuromuscular DiseasesParalysisPhylogenyRecombination, Geneticalpha-FetoproteinsAcute flaccid paralysisBiharenterovirus-88Indianext-generation sequencingrashrecombinantUttar Pradesh

Identifiers

PMID37040226
PMCPMC10284357
OpenAlexW4362460847

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.