Evidence map›Paper›PMID 37039815›Full record

ArticleWorld journal of microbiology & biotechnology2023

Yeast-based system for in vivo evaluation of alleles of the anthocyanin production pathway.

Paulius Lukas Tamošiūnas, Ingus Pērkons, Kaia Kukk

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Paulius Lukas TamošiūnasLatvian Biomedical Research and Study Centre, Ratsupites st. 1, Riga, LV-1067, Latvia. paulius.tamosiunas@biomed.lu.lv.
Ingus PērkonsInstitute of Food Safety, Animal Health and Environment "BIOR", Lejupes st. 3, Riga, LV-1076, Latvia.
Kaia KukkLatvian Biomedical Research and Study Centre, Ratsupites st. 1, Riga, LV-1067, Latvia.
Latvian Biomedical Research and Study Centre · LVInstitute of Food Safety, Animal Health and Environment “BIOR” · LV

Funding

European Regional Development Fund ERAF 1.1.1.2/VIAA/1/18/285European Regional Development Fund ERAF 1.1.1.2/VIAA/1/18/286
6 · The paper itself

Abstract

Plants produce anthocyanins to incite the pollination and seed dispersion performed by pigment-attracted animals. These natural blue-to-red-coloured pigments can be used as food colourants and antioxidants. For this purpose, microbial bioproduction of anthocyanins has become of industrial interest in recent years. 20 new alleles of anthocyanin production pathway genes were extracted and characterised for protein expression level and stability using a developed single-PCR product gene-entry system for tagged protein synthesis in yeast S. cerevisiae. Enzymatic activities of these proteins in the episomally complemented in vivo systems were compared by HPLC-MS analysis. Results show that the codon optimisation of the anthocyanin pathway genes is not essential for the effective heterologous expression in yeast. Elevating the cellular abundance of CHS and F3H enzymes can increase anthocyanidin production from supplemented precursors. New alleles VmF3Hv1 and VuCHS were shown to have the best performance in the analysed system. System complementation with flavonoid 3',5'-hydroxylase substantially increases total anthocyanidin production. The described single-entry yeast episomal complementation system is a convenient and rapid tool for the complex evaluation of new alleles in vivo.

Indexed as

AnthocyaninsSaccharomyces cerevisiaeAllelesFlavonoidsMixed Function OxygenasesAnthocyaninsFlavonoidsMixed Function OxygenasesAnthocyaninChalcone isomeraseChalcone synthaseFlavonoid 3′, 5′-hydroxylaseGolden Gate ligationSaccharomyces cerevisiae

Identifiers

PMID37039815
OpenAlexW4364353158

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.