Evidence map›Paper›PMID 37039747›Full record

ArticleAnimal biotechnology2023

Evidence for selective sweeps in the MHC gene repertoire of various cattle breeds.

Sonali Sonejita Nayak, Manjit Panigrahi, Harshit Kumar, Divya Rajawat, Anurodh Sharma, Bharat Bhushan, Triveni Dutt

Abstract read
In one paragraph

Article in Animal biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. A Comprehensive Review of the Bovine Immune Response to Pathogens.International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sonali Sonejita NayakDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.
Manjit PanigrahiDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.ORCID 0000-0002-8578-2325
Harshit KumarDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.ORCID 0000-0002-7833-3329
Divya RajawatDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.
Anurodh SharmaDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.
Bharat BhushanDivision of Animal Genetics, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.
Triveni DuttLivestock Production and Management Section, Indian Veterinary Research Institute, Izatnagar, Bareilly, UP, India.
Indian Veterinary Research Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Major Histocompatibility Complex (MHC) genes are among the immune genes that have been extensively studied in vertebrates and are necessary for adaptive immunity. In the immunological response to infectious diseases, they play several significant roles. This research paper provides the selection signatures in the MHC region of the bovine genome as well as how certain genes related to innate immunity are undergoing a positive selective sweep. Here, we investigated signatures of historical selection on MHC genes in 15 different cattle populations and a total of 427 individuals. To identify the selection signatures, we have used three separate summary statistics. The findings show potential selection signatures in cattle from whom we isolated genes involved in the MHC. The most significant regions related to the bovine MHC are

Indexed as

GenomeHistocompatibility Antigens Class IAnimalsBreedingCattleHumansImmunity, InnateHistocompatibility Antigens Class ICattleMajor histocompatibility complexnatural selectionpositive selectionselective sweep

Identifiers

PMID37039747
PMCPMC13353470
OpenAlexW4364351781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.