Evidence map›Paper›PMID 37039075›Full record

ArticleDevelopment (Cambridge, England)2023

The Caenorhabditis elegans anchor cell transcriptome: ribosome biogenesis drives cell invasion through basement membrane.

Daniel S Costa, Isabel W Kenny-Ganzert, Qiuyi Chi, Kieop Park, Laura C Kelley, Aastha Garde, David Q Matus, Junhyun Park, Shaul Yogev, Bob Goldstein and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. WormTagDB: A Systematic Survey of Endogenously Tagged Proteins inbioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. A Window into Mammalian Basement Membrane Development: Insights from thebioRxiv : the preprint server for biology · 2023
    Article
  19. Review
  20. Split-GFP lamin as a tool for studyingmicroPublication biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 1 country.

Daniel S CostaDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.ORCID 0000-0003-2179-8800
Isabel W Kenny-GanzertDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.ORCID 0000-0001-6306-4472
Qiuyi ChiDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.
Kieop ParkDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.ORCID 0000-0002-6380-4730
Laura C KelleyDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.
Aastha GardeDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.ORCID 0000-0002-7503-5721
David Q MatusDepartment of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, NY 11794, USA.ORCID 0000-0002-1570-5025
Junhyun ParkDepartment of Neuroscience, Yale School of Medicine, New Haven, CT 06510, USA.
Shaul YogevDepartment of Neuroscience, Yale School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0003-2427-2142
Bob GoldsteinDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0001-6961-675X
Theresa V GibneyDepartment of Biology, University of Virginia, Charlottesville, VA 29903, USA.ORCID 0000-0001-5461-724X
Ariel M PaniDepartment of Biology, University of Virginia, Charlottesville, VA 29903, USA.ORCID 0000-0002-9338-9750
David R SherwoodDepartment of Biology, Duke University, Box 90338, Durham, NC 27708, USA.ORCID 0000-0002-4448-6917
Duke University · USUniversity of Virginia · USYale University · USHoward Hughes Medical Institute · USStony Brook University · USUniversity of North Carolina at Chapel Hill · US

Funding

Integrated Training in Cancer Model SystemsT32CA009156 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DER, CHANNING J. · 1985 to 2020
$19.7M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Understanding how cells invade through basement membrane in vivoR35GM118049 · NIGMS · DUKE UNIVERSITY · PI David R Sherwood · 2016 to 2026
$6.8M
Patterning acentrosomal microtubule arraysR35GM133573 · NIGMS · YALE UNIVERSITY · PI Shaul Yogev · 2019 to 2026
$3.2M
C. elegans Gastrulation: a Model for Understanding Apical Constriction MechanismsR35GM134838 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT P GOLDSTEIN · 2020 to 2026
$2.9M
Dissecting the cell-biological foundations of developmental cell signaling in a living animalR35GM142880 · NIGMS · UNIVERSITY OF VIRGINIA · PI Ariel Matthew Pani · 2021 to 2026
$2.5M
Elucidating the mechanisms underlying cell cycle regulation of invasive behaviorR01GM121597 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI MATUS, DAVID · 2017 to 2021
$2.1M
A comprehensive toolkit to visualize endogenously tagged fluorescent basement membrane components in a living animalR21OD028766 · OD · DUKE UNIVERSITY · PI SHERWOOD, DAVID R · 2020 to 2021
$427k
A Comprehensive Endogenous Basement Membrane Toolkit to Elucidate how Basement Membranes Stretch on Mechanically Active Tissues and Decline during AgingR21OD032430 · OD · DUKE UNIVERSITY · PI SHERWOOD, DAVID R · 2022 to 2023
$427k
NCI NIH HHS T32 CA009156NIGMS NIH HHS R01 GM121597NIGMS NIH HHS R35 GM118049NIGMS NIH HHS R35 GM133573NIGMS NIH HHS R35 GM134838NIGMS NIH HHS R35 GM142880NIH HHS P40 OD010440NIH HHS R21 OD028766NIH HHS R21 OD032430
6 · The paper itself

Abstract

Cell invasion through basement membrane (BM) barriers is important in development, immune function and cancer progression. As invasion through BM is often stochastic, capturing gene expression profiles of actively invading cells in vivo remains elusive. Using the stereotyped timing of Caenorhabditis elegans anchor cell (AC) invasion, we generated an AC transcriptome during BM breaching. Through a focused RNAi screen of transcriptionally enriched genes, we identified new invasion regulators, including translationally controlled tumor protein (TCTP). We also discovered gene enrichment of ribosomal proteins. AC-specific RNAi, endogenous ribosome labeling and ribosome biogenesis analysis revealed that a burst of ribosome production occurs shortly after AC specification, which drives the translation of proteins mediating BM removal. Ribosomes also enrich near the AC endoplasmic reticulum (ER) Sec61 translocon and the endomembrane system expands before invasion. We show that AC invasion is sensitive to ER stress, indicating a heightened requirement for translation of ER-trafficked proteins. These studies reveal key roles for ribosome biogenesis and endomembrane expansion in cell invasion through BM and establish the AC transcriptome as a resource to identify mechanisms underlying BM transmigration.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsBasement MembraneRibosomesTranscriptomeCaenorhabditis elegans ProteinsBasement membraneCaenorhabditis elegansCell invasionEndomembrane expansionRibosome biogenesisTranscriptomeTranslationally controlled tumor protein (TCTP)

Identifiers

PMID37039075
PMCPMC10259517
OpenAlexW4364353610

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.