Evidence map›Paper›PMID 37038995›Full record

ArticleThe Journal of antimicrobial chemotherapy2023

Genetic and biochemical characterization of BIM-1, a novel acquired subgroup B1 MBL found in a Pseudomonas sp. strain from the Brazilian Amazon region.

Cintya O Souza, Rodrigo Cayô, Karla Valéria B Lima, Danielle M Brasiliense, Ana Paula Streling, André V Siqueira, Felipe Alberto-Lei, Josiane T Leal, Carolina S Nodari, Paula Juliana Pérez-Chaparro and 9 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Characterization of GUA-1, a chromosomally encoded ESBL fromAntimicrobial agents and chemotherapy · 2026
    Article
  2. Article
  3. Molecular Epidemiology ofAntibiotics (Basel, Switzerland) · 2024
    Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Cintya O SouzaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.ORCID 0000-0002-5496-3713
Rodrigo CayôUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.
Karla Valéria B LimaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Danielle M BrasilienseSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Ana Paula StrelingUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.
André V SiqueiraUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.
Felipe Alberto-LeiUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.ORCID 0000-0002-2855-3147
Josiane T LealUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.ORCID 0000-0002-8685-3199
Carolina S NodariUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.ORCID 0000-0002-2361-5732
Paula Juliana Pérez-ChaparroDepartment of Clinical Analysis, School of Pharmacy (FCF), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Luana N G C LimaSeção de Bacteriologia e Micologia, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Marcelo O LimaSeção de Meio Ambiente, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Brenda Natasha S CostaSeção de Meio Ambiente, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Thais Karolina L De QueirozSeção de Meio Ambiente, Instituto Evandro Chagas (IEC), Ananindeua, PA, Brazil.
Paola J S N SilvaUniversidade Federal de São Paulo (UNIFESP), Laboratório de Enzimologia, Department of Biophysics, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.
Elza M MamizukaDepartment of Clinical Analysis, School of Pharmacy (FCF), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Marcelo F MarcondesUniversidade Federal de São Paulo (UNIFESP), Laboratório de Enzimologia, Department of Biophysics, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.
John Anthony MccullochDepartment of Clinical Analysis, School of Pharmacy (FCF), Universidade de São Paulo (USP), São Paulo, SP, Brazil.
Ana Cristina GalesUniversidade Federal de São Paulo (UNIFESP), Laboratório ALERTA, Disciplina de Infectologia, Departamento de Medicina, Escola Paulista de Medicina (EPM), São Paulo, SP, Brazil.ORCID 0000-0003-0913-768X
Universidade Federal de São Paulo · BRInstituto Evandro Chagas · BRUniversidade de São Paulo · BRInstituto de Ciências Farmacêuticas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesTo characterize a novel acquired MBL, BIM-1, in a Pseudomonas #2 (subgroup P. guariconensis) strain isolated from the Aurá river located in the Brazilian Amazon hydrographic basin.

methodsWGS using an Illumina® MiSeq System was used to characterize the genome of Pseudomonas sp. IEC33019 strain. Southern blotting/hybridization assays were performed to confirm the location of the MBL-encoding gene, blaBIM-1 (Belém Imipenemase). Antimicrobial susceptibility testing, cloning, and biochemical and phenotypic characterization were performed to determine BIM-1 kinetics.

resultsThe IEC33019 strain showed high resistance rates to β-lactams, ciprofloxacin and aminoglycosides, being susceptible only to polymyxins and susceptible, increased exposure to aztreonam. WGS analysis revealed a novel acquired MBL-encoding gene, blaBIM-1, found as a gene cassette inserted into a class 1 integron (In1326) that also carried qnrVC1 and aadA11e. In1326 was located in a complex transposon, Tn7122, carried by a 52.7 kb conjugative plasmid (pIEC33019) with a toxin/antitoxin system (vapB/vapC). BIM-1 belongs to the molecular subgroup B1 and shares 70.2% and 64.9% similarity with SIM-1 and IMP-1, respectively. Kinetics analysis of BIM-1 showed hydrolytic activity against all β-lactams tested.

conclusionsBIM-1 is a novel acquired MBL encoded by a gene carried by mobile genetic elements, which can be transferred to other Gram-negative bacilli (GNB). Because the IEC33019 strain was recovered from a river impacted by a populous metropolitan region with poor basic sanitation and served by limited potable freshwater, it would be important to establish the role of the BIM-1-producing GNB as nosocomial pathogens and/or as colonizers of the riverside population in this geographical region.

Indexed as

beta-LactamasesPseudomonasAnti-Bacterial Agentsbeta-LactamsBrazilMicrobial Sensitivity TestsPseudomonas aeruginosaAnti-Bacterial Agentsbeta-Lactamasesbeta-Lactams

Identifiers

PMID37038995
PMCPMC10232235
OpenAlexW4364352865

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.