Evidence map›Paper›PMID 37035069›Full record

ArticleFrontiers in plant science2023

Multi-omics analyses reveal the crosstalk between the circadian clock and the response to herbicide application in

Ke Chen, Xiao Su, Haona Yang, Yajun Peng, Lamei Wu, Zhenghong Zhao, Tao Lin, Lianyang Bai, Lifeng Wang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Ke ChenLongping Branch, College of Biology, Hunan University, Changsha, China.
Xiao SuState Key Laboratory of Agrobiotechnology, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing, China.
Haona YangLongping Branch, College of Biology, Hunan University, Changsha, China.
Yajun PengLongping Branch, College of Biology, Hunan University, Changsha, China.
Lamei WuLongping Branch, College of Biology, Hunan University, Changsha, China.
Zhenghong ZhaoLongping Branch, College of Biology, Hunan University, Changsha, China.
Tao LinState Key Laboratory of Agrobiotechnology, Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, College of Horticulture, China Agricultural University, Beijing, China.
Lianyang BaiLongping Branch, College of Biology, Hunan University, Changsha, China.
Lifeng WangLongping Branch, College of Biology, Hunan University, Changsha, China.
Hunan University · CNChina Agricultural University · CNHunan Academy of Agricultural Sciences · CNHunan Rice Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants have evolved circadian clock systems that enable biological processes to occur in tandem with periodic changes in the environment. However, it is largely unknown whether crosstalk occurs between the circadian clock and the response to herbicide in rice. We identified 19 conserved rhythmic metabolites which were response to pesticide application and their metabolic abundance peaked mainly at ZT2 or ZT14-ZT18. We found a series of glyphosate, s-Metolachlor, fenclorim, metcamifen and GA3 response genes were expressed following stable circadian rhythms. In order to determine the patterns of their temporal expression, co-expression network analysis was done on 10,467 genes that were periodically expressed throughout a 24-hour period. Next, we identified 4,031 potential direct target genes of

Indexed as

circadian clockherbicidesmetabolomeOryza sativa L.RNA-seq

Identifiers

PMID37035069
PMCPMC10080033
OpenAlexW4360868574

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.