Evidence map›Paper›PMID 37033395›Full record

ArticleInternational journal of clinical and experimental pathology2023

APOBEC3B expression has prognostic significance in cervical cancer.

Si-Qi Zhang, Jun Zhang, Yang Yu, Miao-Mei Yu, Jiang Wei, Yan-Hong Tang

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In one paragraph

Article in International journal of clinical and experimental pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Si-Qi ZhangDepartment of Obstetrics and Gynecology, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Jun ZhangClinical Medical Research Center, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Yang YuClinical Medical Research Center, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Miao-Mei YuClinical Medical Research Center, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Jiang WeiClinical Medical Research Center, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Yan-Hong TangDepartment of Obstetrics and Gynecology, The Third Affiliated Hospital of Soochow University Changzhou 213003, Jiangsu, China.
Soochow University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveCervical cancer is one of the leading fatal diseases in women, and the role of Apolipoprotein B mRNA editing enzyme catalytic subunit 3B (APOBEC3B) in cervical cancer is uncertain.

methodsFour Gene Expression Omnibus (GEO) mRNA microarray datasets were analyzed to identify differentially expressed genes (DEGs) between cervical cancer and normal cervical tissues. The results were validated using a The Cancer Genome Atlas (TCGA)-cervical cancer (CESC) dataset. Expression profiles and patients' clinical data were used to investigate the relationship between APOBEC3B expression and cervical cancer survival. APOBEC3B co-expressed genes were subjected to enrichment analyses, and correlations between APOBEC3B expression and immunologic infiltrates were investigated using Tumor Immune Estimation Resource (TIMER). We generated receiver operating characteristic curve (ROC) curves to evaluate the performance of APOBEC3B expression in predicting cervical cancer prognosis.

resultsFourteen overlapping DEGs were obtained, and APOBEC3B was chosen as a candidate gene. TCGA data further confirmed that APOBEC3B was significantly increased in cervical cancer, relative to normal adjacent tissues, and this expression was associated with poor clinical outcome. Results from quantitative real time polymerase chain reaction (RT-qPCR) and immunohistochemical staining of cervical carcinoma tissues supported these findings. Enrichment analysis showed that APOBEC3B co-expressed genes were mainly enriched in cell cycle, DNA replication and chromosomal region. Moreover, APOBEC3B expression was significantly associated with T stage, M stage, primary therapy outcome and poor clinical prognosis in cervical cancer. Similarly, APOBEC3B was closely correlated with gene markers of diverse immune cells. APOBEC3B expression was an independent indicator of cervical cancer prognosis, according to univariate Cox and ROC analyses.

conclusionHigh APOBEC3B expression is strongly related to a poor prognosis in cervical cancer patients.

Indexed as

APOBEC3Bbioinformatics analysiscervical cancerGEOTCGA

Identifiers

PMID37033395
PMCPMC10076974
OpenAlexW4363645043

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.