Evidence map›Paper›PMID 37032376›Full record

ArticleScientific reports2023

Cynomolgus monkey's retina volume reference database based on hybrid deep learning optical coherence tomography segmentation.

Nora Denk, Christian Freichel, Philippe Valmaggia, Nadja Inglin, Hendrik P N Scholl, Pascal Kaiser, Sylvie Wise, Marc Vezina, Peter M Maloca

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Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Nora DenkPharma Research and Early Development (pRED), Pharmaceutical Sciences (PS), Roche, Innovation Center Basel, 4070, Basel, Switzerland.
Christian FreichelPharma Research and Early Development (pRED), Pharmaceutical Sciences (PS), Roche, Innovation Center Basel, 4070, Basel, Switzerland.
Philippe ValmaggiaDepartment of Ophthalmology, University Hospital Basel, 4031, Basel, Switzerland.
Nadja InglinInstitute of Molecular and Clinical Ophthalmology Basel, 4031, Basel, Switzerland.
Hendrik P N SchollDepartment of Ophthalmology, University Hospital Basel, 4031, Basel, Switzerland.
Pascal KaiserSupercomputing Systems, 8005, Zurich, Switzerland.
Sylvie WiseCharles River Laboratories, Senneville, QC, H9X 1C1, Canada.
Marc VezinaCharles River Laboratories, Senneville, QC, H9X 1C1, Canada.
Peter M MalocaDepartment of Ophthalmology, University Hospital Basel, 4031, Basel, Switzerland. peter.maloca@iob.ch.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cynomolgus monkeys (Macaca fascicularis) are commonly used in pre-clinical ocular studies. However, studies that report the morphological features of the macaque retina are based only on minimal sample sizes; therefore, little is known about the normal distribution and background variation. This study was conducted using optical coherence tomography (OCT) imaging to investigate the variations in retinal volumes of healthy cynomolgus monkeys and the effects of sex, origin, and eye side on the retinal volumes to establish a comprehensive reference database. A machine-learning algorithm was employed to segment the retina within the OCT data (i.e., generated pixel-wise labels). Furthermore, a classical computer vision algorithm has identified the deepest point in a foveolar depression. The retinal volumes were determined and analyzed based on this reference point and segmented retinal compartments. Notably, the overall foveolar mean volume in zone 1, which is the region of the sharpest vision, was 0.205 mm

Indexed as

Deep LearningTomography, Optical CoherenceAlgorithmsAnimalsMacaca fascicularisRetina

Identifiers

PMID37032376
PMCPMC10083168

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.