Evidence map›Paper›PMID 37028063›Full record

ArticleIEEE transactions on medical imaging2023

FDU-Net: Deep Learning-Based Three-Dimensional Diffuse Optical Image Reconstruction.

Bin Deng, Hanxue Gu, Hongmin Zhu, Ken Chang, Katharina V Hoebel, Jay B Patel, Jayashree Kalpathy-Cramer, Stefan A Carp

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bin Deng
Hanxue Gu
Hongmin Zhu
Ken Chang
Katharina V Hoebel
Jay B Patel
Jayashree Kalpathy-Cramer
Stefan A Carp

Funding

Neuroimaging Training ProgramT32EB001680 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BRUCE R ROSEN · 2003 to 2026
$3.8M
Dynamic Optical Imaging Biomarkers of Tumor Response to TherapyR01CA187595 · NCI · MASSACHUSETTS GENERAL HOSPITAL · PI CARP, STEFAN ALEXANDRU · 2015 to 2019
$2.6M
Multiparametric multimodal imaging for breast cancer neoadjuvant chemotherapy monitoringK01EB027726 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI DENG, BIN · 2019 to 2022
$563k
NCI NIH HHS R01 CA187595NIBIB NIH HHS K01 EB027726NIBIB NIH HHS T32 EB001680
6 · The paper itself

Abstract

Near-infrared diffuse optical tomography (DOT) is a promising functional modality for breast cancer imaging; however, the clinical translation of DOT is hampered by technical limitations. Specifically, conventional finite element method (FEM)-based optical image reconstruction approaches are time-consuming and ineffective in recovering full lesion contrast. To address this, we developed a deep learning-based reconstruction model (FDU-Net) comprised of a Fully connected subnet, followed by a convolutional encoder-Decoder subnet, and a U-Net for fast, end-to-end 3D DOT image reconstruction. The FDU-Net was trained on digital phantoms that include randomly located singular spherical inclusions of various sizes and contrasts. Reconstruction performance was evaluated in 400 simulated cases with realistic noise profiles for the FDU-Net and conventional FEM approaches. Our results show that the overall quality of images reconstructed by FDU-Net is significantly improved compared to FEM-based methods and a previously proposed deep-learning network. Importantly, once trained, FDU-Net demonstrates substantially better capability to recover true inclusion contrast and location without using any inclusion information during reconstruction. The model was also generalizable to multi-focal and irregularly shaped inclusions unseen during training. Finally, FDU-Net, trained on simulated data, could successfully reconstruct a breast tumor from a real patient measurement. Overall, our deep learning-based approach demonstrates marked superiority over the conventional DOT image reconstruction methods while also offering over four orders of magnitude acceleration in computational time. Once adapted to the clinical breast imaging workflow, FDU-Net has the potential to provide real-time accurate lesion characterization by DOT to assist the clinical diagnosis and management of breast cancer.

Indexed as

Breast NeoplasmsDeep LearningAlgorithmsFemaleHumansImage Processing, Computer-AssistedImaging, Three-DimensionalPhantoms, Imaging

Identifiers

PMID37028063
PMCPMC10446911

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.