Evidence map›Paper›PMID 37026274›Full record

ArticleIndian journal of ophthalmology2023

Optimization and evaluation of tear protein elution from Schirmer's strips in dry eye disease.

Madhuri Amulya Koduri, Deeksha Prasad, Tejaswini Pingali, Vijay Kumar Singh, Swapna S Shanbhag, Sayan Basu, Vivek Singh

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Article in Indian journal of ophthalmology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Madhuri Amulya KoduriProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, Telangana; Manipal Academy of Higher Education, Karnataka, India.
Deeksha PrasadProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, Telangana; Manipal Academy of Higher Education, Karnataka, India.
Tejaswini PingaliProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, Telangana, India.
Vijay Kumar SinghProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, Telangana, India.
Swapna S ShanbhagProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute; The Cornea Institute, L V Prasad Eye Institute, Hyderabad, Telangana, India.
Sayan BasuProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute; The Cornea Institute, L V Prasad Eye Institute, Hyderabad, Telangana, India.
Vivek SinghProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, Telangana, India.
L V Prasad Eye Institute · INManipal Academy of Higher Education · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeExtraction of tear protein from Schirmer's strip is a prerequisite for the proper identification and screening of biomarkers in dry eye disease. The study compares different methods of extraction of tear proteins from the Schirmer's strip.

methodsReflex tear was collected from healthy controls (HC; n = 12), Stevens-Johnson syndrome (SJS; n = 3) and dry eye disease (DED; n = 3) patients using capillary tube. This tear was used to measure the volume absorbed by Schirmer's strip per microliter. Different buffers (6) were used to compare the protein yield from the Schirmer's strip in four different conditions. The tear proteins extracted using the highest protein yield buffer were analyzed by mass spectrometry.

resultsA linear relationship between the tear volume and wetting length was observed (r = 0.0.997, n = 6). The highest yield was observed after incubation of the Schirmer's strip in 100 mM ammonium bicarbonate (ABC) with 0.25% Nonidet P-40(NP-40) at 4°C for an hour (P < 0.00005). The in-solution digestion of tear eluted in the above condition 100 Mm ABC + 0.25% NP-40 with one-hour incubation yielded a total of 2119 proteins in HC, SJS, and DED. The unique protein observed in SJS and DED was 0.6% and 17.9%, respectively. The significantly expressed proteins are associated with innate immune response, proteolysis, wound healing, and defense response.

conclusionA method for extraction of protein from Schirmer's strip was optimized for increase in protein yield from the tear sample. SJS and DED tear samples have unique protein signature. The study will aid in better design of tear protein-based experimental study.

Indexed as

Dry Eye SyndromesEye ProteinsHumansOctoxynolTearsEye ProteinsNonidet P-40Octoxynoltear proteinsDry eye diseaseSchirmer's stripStevens–Johnson syndrometear proteomics

Identifiers

PMID37026274
PMCPMC10276694
OpenAlexW4362692746

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.