Evidence map›Paper›PMID 37025788›Full record

ArticleHeliyon2023

Construction of pSM201v: A broad host range replicative vector based on shortening of RSF1010.

S V Vamsi Bharadwaj, Diptee S Tiwari, Tonmoy Ghosh, Sandhya Mishra

Open access · goldAbstract read
In one paragraph

Article in Heliyon, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

S V Vamsi BharadwajApplied Phycology and Biotechnology Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, 364002, India.
Diptee S TiwariApplied Phycology and Biotechnology Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, 364002, India.
Tonmoy GhoshDepartment of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Khandwa Road, Simrol, 453552, Madhya Pradesh, India.
Sandhya MishraApplied Phycology and Biotechnology Division, CSIR-Central Salt & Marine Chemicals Research Institute, Bhavnagar, 364002, India.
Central Salt and Marine Chemicals Research Institute · INIndian Institute of Technology Indore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite possessing attractive features such as autotrophic growth on minimal media, industrial applications of cyanobacteria are hindered by a lack of genetic manipulative tools. There are two important features that are important for an effective manipulation: a vector which can carry the gene, and an induction system activated through external stimuli, giving us control over the expression. In this study, we describe the construction of an improved RSF1010-based vector as well as a temperature-inducible RNA thermometer. RSF1010 is a well-studied incompatibility group Q (IncQ) vector, capable of replication in most Gram negative, and some Gram positive bacteria. Our designed vector, named pSM201v, can be used as an expression vector in some Gram positive and a wide range of Gram negative bacteria including cyanobacteria. An induction system activated via physical external stimuli such as temperature, allows precise control of overexpression. pSM201v addresses several drawbacks of the RSF1010 plasmid; it has a reduced backbone size of 5189 bp compared to 8684 bp of the original plasmid, which provides more space for cloning and transfer of cargo DNA into the host organism. The mobilization function, required for plasmid transfer into several cyanobacterial strains, is reduced to a 99 bp region, as a result that mobilization of this plasmid is no longer linked to the plasmid replication. The RNA thermometer, named DTT1, is based on a RNA hairpin strategy that prevents expression of downstream genes at temperatures below 30 °C. Such RNA elements are expected to find applications in biotechnology to economically control gene expression in a scalable manner.

Indexed as

CyanobacteriaPlasmid vectorRNA thermometer

Identifiers

PMID37025788
PMCPMC10070531
OpenAlexW4327692991

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.