Evidence map›Paper›PMID 37024794›Full record

ArticleBMC genomics2023

Intercellular crosstalk in adult dental pulp is mediated by heparin-binding growth factors Pleiotrophin and Midkine.

Natnicha Jiravejchakul, Gabriela L Abe, Martin Loza, Soyoung Park, Ponpan Matangkasombut, Jun-Ichi Sasaki, Satoshi Imazato, Diego Diez, Daron M Standley

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Characterizing Stroke Clots Using Single-Cell Sequencing.Journal of the American Heart Association · 2025
    Article
  5. Article
  6. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Natnicha JiravejchakulDepartment of Genome Informatics, Research Institute for Microbial Diseases, Osaka University, 3-1 Yamadaoka, Suita, 565-0871, Japan.
Gabriela L AbeDepartment of Advanced Functional Materials Science, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, 565-0871, Japan. abe.gabriela.dent@osaka-u.ac.jp.
Martin LozaLaboratory of Functional Analysis in silico, Human Genome Center, The Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokane-dai, Minato-ku, Tokyo, 108- 8639, Japan.
Soyoung ParkDepartment of Systems Immunology, Immunology Frontier Research Center, Osaka University, 3-1 Yamadaoka, Suita, 565-0871, Japan.
Ponpan MatangkasombutDepartment of Microbiology, Faculty of Science, Mahidol University, Bangkok, 10400, Thailand.
Jun-Ichi SasakiDepartment of Dental Biomaterials, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, 565-0871, Japan.
Satoshi ImazatoDepartment of Advanced Functional Materials Science, Osaka University Graduate School of Dentistry, 1-8 Yamadaoka, Suita, 565-0871, Japan.
Diego DiezQuantitative Immunology Research Unit, Immunology Frontier Research Center, Osaka University, 3-1 Yamadaoka, Suita, 565-0871, Japan.
Daron M StandleyDepartment of Genome Informatics, Research Institute for Microbial Diseases, Osaka University, 3-1 Yamadaoka, Suita, 565-0871, Japan. standley@ifrec.osaka-u.ac.jp.
The University of Osaka · JPMahidol University · THThe University of Tokyo · JP

Funding

Japan Agency for Medical Research and Development JP21am0101108Japan Society for the Promotion of Science JP20K07538Japan Society for the Promotion of Science JP22K21301
6 · The paper itself

Abstract

backgroundIn-depth knowledge of the cellular and molecular composition of dental pulp (DP) and the crosstalk between DP cells that drive tissue homeostasis are not well understood. To address these questions, we performed a comparative analysis of publicly available single-cell transcriptomes of healthy adult human DP to 5 other reference tissues: peripheral blood mononuclear cells, bone marrow, adipose tissue, lung, and skin.

resultsOur analysis revealed that DP resident cells have a unique gene expression profile when compared to the reference tissues, and that DP fibroblasts are the main cell type contributing to this expression profile. Genes coding for pleiotrophin (PTN) and midkine (MDK), homologous heparin-binding growth-factors, possessed the highest differential expression levels in DP fibroblasts. In addition, we identified extensive crosstalk between DP fibroblasts and several other DP resident cells, including Schwann cells, mesenchymal stem cells and odontoblasts, mediated by PTN and MDK.

conclusionsDP fibroblasts emerge as unappreciated players in DP homeostasis, mainly through their crosstalk with glial cells. These findings suggest that fibroblast-derived growth factors possess major regulatory functions and thus have a potential role as dental therapeutic targets.

Indexed as

Dental PulpLeukocytes, MononuclearAdultCarrier ProteinsCytokinesFibroblast Growth FactorsHeparinHumansMidkineCarrier ProteinsCytokinesFibroblast Growth FactorsHeparinMidkinepleiotrophinDental PulpFibroblastsHomeostasisMidkineParacrine communicationPleiotrophinRNA-seqSingle-cell analysisTranscriptome

Identifiers

PMID37024794
PMCPMC10077760
OpenAlexW4362666735

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.