Evidence map›Paper›PMID 37024727›Full record

ArticleNature chemical biology2023

Design of cell-type-specific hyperstable IL-4 mimetics via modular de novo scaffolds.

Huilin Yang, Umut Y Ulge, Alfredo Quijano-Rubio, Zachary J Bernstein, David R Maestas, Jung-Ho Chun, Wentao Wang, Jian-Xin Lin, Kevin M Jude, Srujan Singh and 15 more

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Protein engineering: status report.Protein engineering, design & selection : PEDS · 2026
    Review
  5. Tuning of G-CSFR signaling by de novo-designed agonists.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Cytokines in cancer.Cancer cell · 2025
    Review
  10. The JAK-STAT pathway: from structural biology to cytokine engineering.Signal transduction and targeted therapy · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 8 institutions in 1 country.

Huilin Yang *Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Umut Y Ulge *Department of Biochemistry and Institute for Protein Design, University of Washington, Seattle, WA, USA.
Alfredo Quijano-Rubio *Department of Biochemistry and Institute for Protein Design, University of Washington, Seattle, WA, USA.
Zachary J Bernstein *Translational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
David R MaestasTranslational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jung-Ho ChunDepartment of Biochemistry and Institute for Protein Design, University of Washington, Seattle, WA, USA.
Wentao WangTranslational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Jian-Xin LinLaboratory of Molecular Immunology and the Immunology Center, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Kevin M JudeDepartments of Molecular and Cellular Physiology and Structural Biology, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0002-3675-5136
Srujan SinghDepartment of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.ORCID 0000-0002-7498-4298
Brian T Orcutt-JahnsDepartment of Bioengineering, University of California, Los Angeles, CA, USA.ORCID 0000-0002-1436-1224
Peng LiLaboratory of Molecular Immunology and the Immunology Center, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Jody MouTranslational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Liam ChungTranslational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Yun-Huai KuoDepartment of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Yasmin H AliCollege of Medicine, Florida State University, Tallahassee, FL, USA.
Aaron S MeyerDepartment of Bioengineering, University of California, Los Angeles, CA, USA.
Warren L GraysonDepartment of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA.
Nicola M HellerDepartment of Anesthesiology and Critical Care Medicine, Johns Hopkins University, School of Medicine, Baltimore, MD, USA.ORCID 0000-0001-7247-2021
K Christopher GarciaDepartments of Molecular and Cellular Physiology and Structural Biology, Stanford University School of Medicine, Stanford, CA, USA.ORCID 0000-0001-9273-0278
Warren J LeonardLaboratory of Molecular Immunology and the Immunology Center, National Heart, Lung and Blood Institute, National Institutes of Health, Bethesda, MD, USA.
Daniel-Adriano SilvaDepartment of Biochemistry and Institute for Protein Design, University of Washington, Seattle, WA, USA.ORCID 0000-0002-3195-9009
Jennifer H ElisseeffTranslational Tissue Engineering Center, Johns Hopkins University School of Medicine, Baltimore, MD, USA.ORCID 0000-0002-5066-1996
David BakerDepartment of Biochemistry and Institute for Protein Design, University of Washington, Seattle, WA, USA. dabaker@uw.edu.ORCID 0000-0001-7896-6217
Jamie B SpanglerDepartment of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, MD, USA. jamie.spangler@jhu.edu.ORCID 0000-0001-8187-3732
Johns Hopkins University · USUniversity of Washington · USNational Institutes of Health · USBloomberg (United States) · USHoward Hughes Medical Institute · USUniversity of California, Los Angeles · USFlorida State University · USStanford University · US

Funding

User Training & OutreachP30GM138396 · NIGMS · UCHICAGO ARGONNE, LLC · PI ROBERT F. FISCHETTI · 2020 to 2026
$34.3M
IL-2 Family Cytokines and their Receptors-- Molecular Regulation via STATsZIAHL005402 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI LEONARD, WARREN J · 2009 to 2025
$26.8M
Biomaterials-directed regenerative immunotherapiesDP1AR076959 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI ELISSEEFF, JENNIFER H · 2019 to 2023
$5.7M
Structure-based engineering of immune cytokine signalingR01AI051321 · NIAID · STANFORD UNIVERSITY · PI Kenan Christopher GARCIA · 2002 to 2026
$5.6M
Design of de novo interleukin mimics for targeted immunotherapyR01CA240339 · NCI · UNIVERSITY OF WASHINGTON · PI BAKER, DAVID · 2019 to 2023
$2.1M
High-Speed High-Sensitivity Detector for X-ray Micro-Crystallography at GM/CA@APSS10OD012289 · OD · UNIVERSITY OF CHICAGO · PI FISCHETTI, ROBERT F. · 2014 to 2014
$2.0M
Immunoengineered nanotechnology for targeted expansion of regulatory T cellsR01EB029455 · NIBIB · JOHNS HOPKINS UNIVERSITY · PI SPANGLER, JAMIE BERTA · 2020 to 2023
$1.7M
Mapping the effector response space of antibody combinationsU01AI148119 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MEYER, AARON SAMUEL, NIMMERJAHN, FALK · 2020 to 2024
$1.6M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA240339NIAID NIH HHS R01 AI051321NIAID NIH HHS U01 AI148119NIAMS NIH HHS DP1 AR076959NIBIB NIH HHS R01 EB029455NIGMS NIH HHS P30 GM138396NIH HHS S10 OD012289
6 · The paper itself

Abstract

The interleukin-4 (IL-4) cytokine plays a critical role in modulating immune homeostasis. Although there is great interest in harnessing this cytokine as a therapeutic in natural or engineered formats, the clinical potential of native IL-4 is limited by its instability and pleiotropic actions. Here, we design IL-4 cytokine mimetics (denoted Neo-4) based on a de novo engineered IL-2 mimetic scaffold and demonstrate that these cytokines can recapitulate physiological functions of IL-4 in cellular and animal models. In contrast with natural IL-4, Neo-4 is hyperstable and signals exclusively through the type I IL-4 receptor complex, providing previously inaccessible insights into differential IL-4 signaling through type I versus type II receptors. Because of their hyperstability, our computationally designed mimetics can directly incorporate into sophisticated biomaterials that require heat processing, such as three-dimensional-printed scaffolds. Neo-4 should be broadly useful for interrogating IL-4 biology, and the design workflow will inform targeted cytokine therapeutic development.

Indexed as

CytokinesInterleukin-4AnimalsSignal TransductionCytokinesInterleukin-4

Identifiers

PMID37024727
PMCPMC10697138
OpenAlexW4362664976

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.