Evidence map›Paper›PMID 37022875›Full record

ArticleIEEE transactions on bio-medical engineering2023

Explainable Multimodal Deep Dictionary Learning to Capture Developmental Differences From Three fMRI Paradigms.

Lan Yang, Chen Qiao, Huiyu Zhou, Vince D Calhoun, Julia M Stephen, Tony W Wilson, Yuping Wang

Abstract read
In one paragraph

Article in IEEE transactions on bio-medical engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lan Yang
Chen Qiao
Huiyu Zhou
Vince D Calhoun
Julia M Stephen
Tony W Wilson
Yuping Wang

Funding

Trans-omics Integration of Multi-omics Studies for OsteoporosisU19AG055373 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI YU-PING WANG · 2017 to 2026
$24.3M
Stress-Induced Aberrations in the Mitochondrial Redox Environment Impact Developing Neural Circuits Supporting Cognitive ControlP20GM144641 · NIGMS · FATHER FLANAGAN'S BOYS' HOME · PI Rachel K. Spooner · 2022 to 2026
$15.1M
DEVELOPMENTAL MULTIMODAL IMAGING OF NEUROCOGNITIVE DYNAMICS (DEV-MIND)R01MH121101 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI WILSON, TONY W · 2019 to 2023
$5.8M
MULTIMODAL IMAGING OF NEUROHIV DYNAMICS (MIND): AN OMAHA-PITTSBURGH CONSORTIUMR01MH118013 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI WILSON, TONY W · 2018 to 2022
$4.9M
THE PROGRESSIVE ELEVATION OF SPONTANEOUS CORTICAL ACTIVITY IN HAND (PESCAH) PROJECTR01MH116782 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI WILSON, TONY W · 2018 to 2022
$3.4M
Integration of brain imaging with genomic and epigenomic dataR01MH104680 · NIMH · TULANE UNIVERSITY OF LOUISIANA · PI CALHOUN, VINCE D, DENG, HONG-WEN · 2014 to 2017
$2.1M
Integration of fMRI imaging, genomics, network and biological knowledgeR01MH107354 · NIMH · TULANE UNIVERSITY OF LOUISIANA · PI WANG, YU-PING · 2015 to 2018
$1.9M
Integration of multiscale genomic data for comprehensive analysis of complex diseR01GM109068 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI WANG, YU-PING · 2014 to 2018
$1.6M
Integration of brain imaging and multi-omics data for improved diagnosis and prediction of mental disordersR56MH124925 · NIMH · TULANE UNIVERSITY OF LOUISIANA · PI WANG, YU-PING · 2021 to 2022
$1.1M
NIA NIH HHS U19 AG055373NIGMS NIH HHS P20 GM144641NIGMS NIH HHS R01 GM109068NIMH NIH HHS R01 MH104680NIMH NIH HHS R01 MH107354NIMH NIH HHS R01 MH116782NIMH NIH HHS R01 MH118013NIMH NIH HHS R01 MH121101NIMH NIH HHS R56 MH124925
6 · The paper itself

Abstract

objectiveMultimodal-based methods show great potential for neuroscience studies by integrating complementary information. There has been less multimodal work focussed on brain developmental changes.

methodsWe propose an explainable multimodal deep dictionary learning method to uncover both the commonality and specificity of different modalities, which learns the shared dictionary and the modality-specific sparse representations based on the multimodal data and their encodings of a sparse deep autoencoder.

resultsBy regarding three fMRI paradigms collected during two tasks and resting state as modalities, we apply the proposed method on multimodal data to identify the brain developmental differences. The results show that the proposed model can not only achieve better performance in reconstruction, but also yield age-related differences in reoccurring patterns. Specifically, both children and young adults prefer to switch among states during two tasks while staying within a particular state during rest, but the difference is that children possess more diffuse functional connectivity patterns while young adults have more focused functional connectivity patterns. CONCLUSION AND SIGNIFICANCE: To uncover the commonality and specificity of three fMRI paradigms to developmental differences, multimodal data and their encodings are used to train the shared dictionary and the modality-specific sparse representations. Identifying brain network differences helps to understand how the neural circuits and brain networks form and develop with age.

Indexed as

BrainMagnetic Resonance ImagingBrain MappingChildHumansLearningRestYoung Adult

Identifiers

PMID37022875
PMCPMC11045007

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.