Evidence map›Paper›PMID 37022613›Full record

ArticleImmunologic research2023

Designing of multi-epitope peptide vaccine against Acinetobacter baumannii through combined immunoinformatics and protein interaction-based approaches.

Jyotirmayee Dey, Soumya Ranjan Mahapatra, Pawan K Singh, Samudyata C Prabhuswamimath, Namrata Misra, Mrutyunjay Suar

Open access · bronzeAbstract read
In one paragraph

Article in Immunologic research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
14.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 85 citations in OpenAlex.

  1. Data-driven Atlas ofFrontiers in cellular and infection microbiology · 2026
    Pooled it
  2. Development a novel in silico mRNA vaccine against Clostridium difficile.Journal, genetic engineering & biotechnology · 2026
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  7. Computational design of a novel chimeric multi-epitope vaccine against chlamydia trachomatis serovar a to prevent trachoma.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jyotirmayee DeySchool of Biotechnology, Kalinga Institute of Industrial Technology (KIIT), Deemed to be University, -751024, Bhubaneswar, India.
Soumya Ranjan MahapatraSchool of Biotechnology, Kalinga Institute of Industrial Technology (KIIT), Deemed to be University, -751024, Bhubaneswar, India.
Pawan K SinghBVG Life Sciences Limited, Pune, - 411034, India.
Samudyata C PrabhuswamimathDepartment of Biotechnology and Bioinformatics, School of Life Sciences, JSS Academy of Higher Education and Research, -570015, Mysuru, Karnataka, India.
Namrata MisraSchool of Biotechnology, Kalinga Institute of Industrial Technology (KIIT), Deemed to be University, -751024, Bhubaneswar, India. namrata@kiitincubator.in.ORCID 0000-0003-1813-6478
Mrutyunjay SuarSchool of Biotechnology, Kalinga Institute of Industrial Technology (KIIT), Deemed to be University, -751024, Bhubaneswar, India. msuar@kiitbiotech.ac.in.
KIIT University · INJSS Academy of Higher Education and Research · INLG (India) · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acinetobacter baumannii is one of the major pathogenic ESKAPE bacterium, which is responsible for about more than 722,000 cases in a year, globally. Despite the alarming increase in multidrug resistance, a safe and effective vaccine for Acinetobacter infections is still not available. Hence in the current study, a multiepitope vaccine construct was developed using linear B cell, cytotoxic T cell, and helper T cell epitopes from the antigenic and well-conserved lipopolysaccharide assembly proteins employing systematic immunoinformatics and structural vaccinology strategies. The multi-peptide vaccine was predicted to be highly antigenic, non-allergenic, non-toxic, and cover maximum population coverage worldwide. Further, the vaccine construct was modeled along with adjuvant and peptide linkers and validated to achieve a high-quality three-dimensional structure which was subsequently utilized for cytokine prediction, disulfide engineering, and docking analyses with Toll-like receptor (TLR4). Ramachandran plot showed 98.3% of the residues were located in the most favorable and permitted regions, thereby corroborating the feasibility of the modeled vaccine construct. Molecular dynamics simulation for a 100 ns timeframe further confirmed the stability of the binding vaccine-receptor complex. Finally, in silico cloning and codon adaptation were also performed with the pET28a (+) plasmid vector to determine the efficiency of expression and translation of the vaccine. Immune simulation studies demonstrated that the vaccine could trigger both B and T cell responses and can elicit strong primary, secondary, and tertiary immune responses. The designed multi-peptide subunit vaccine would certainly expedite the experimental approach for the development of a vaccine against A. baumannii infection.

Indexed as

Acinetobacter baumanniiAdjuvants, ImmunologicAdjuvants, PharmaceuticEpitopes, T-LymphocyteVaccines, SubunitAdjuvants, ImmunologicAdjuvants, PharmaceuticEpitopes, T-LymphocyteVaccines, SubunitAcinetobacter baumanniiImmunoinformaticsLipopolysaccharideslptDlptE

Identifiers

PMID37022613
PMCPMC10078064
OpenAlexW4362657731

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.