Evidence map›Paper›PMID 37021392›Full record

ArticleCancer discovery2023

Analysis of Donor Pancreata Defines the Transcriptomic Signature and Microenvironment of Early Neoplastic Lesions.

Eileen S Carpenter, Ahmed M Elhossiny, Padma Kadiyala, Jay Li, Jake McGue, Brian D Griffith, Yaqing Zhang, Jacob Edwards, Sarah Nelson, Fatima Lima and 20 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
28.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 122 citations in OpenAlex.

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  13. GATA4 loss promotes mutantbioRxiv : the preprint server for biology · 2026
    Article
  14. Article
  15. Article
  16. Pancreatic cancer.Nature reviews. Disease primers · 2026
    Review
  17. Article
  18. Article
  19. Article
  20. Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

30 authors at 3 institutions in 1 country.

Eileen S Carpenter *Department of Internal Medicine, Division of Gastroenterology and Hepatology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-6775-6943
Ahmed M Elhossiny *Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-0884-8754
Padma Kadiyala *Immunology Graduate Program, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-3273-9905
Jay LiMedical Scientist Training Program, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-8146-4450
Jake McGueDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-6131-7798
Brian D GriffithDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-6580-7217
Yaqing ZhangDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-9185-4364
Jacob EdwardsDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-5396-2751
Sarah NelsonDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-5105-8638
Fatima LimaDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0009-0002-4203-9053
Katelyn L DonahueCancer Biology Program, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-9535-9275
Wenting DuDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-6765-0129
Allison C BischoffCancer Biology Program, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-5119-5272
Danyah AlomariDepartment of Internal Medicine, Division of Gastroenterology and Hepatology, University of Michigan, Ann Arbor, Michigan.ORCID 0009-0006-1669-5689
Hannah R WatkoskeDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-2518-6457
Michael MatteaDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan.ORCID 0009-0006-6144-7668
Stephanie TheCancer Data Science Resource, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-6660-4136
Carlos E EspinozaDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0009-0000-0460-1514
Meredith BarrettDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-5476-0118
Christopher J SonnendayDepartment of Surgery, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-1632-6529
Nicholas OldenGift of Life Michigan, Ann Arbor, Michigan.ORCID 0009-0004-2454-0885
Chin-Tung ChenColorectal Cancer Research Center, Memorial Sloan Kettering Cancer Center, New York, New York.ORCID 0000-0002-3887-6070
Nicole PetersonDepartment of Internal Medicine, Division of Hematology and Oncology, University of Michigan, Ann Arbor, Michigan.ORCID 0009-0000-6035-4124
Valerie GunchickDepartment of Internal Medicine, Division of Hematology and Oncology, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-9392-0644
Vaibhav SahaiRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-1892-1548
Arvind RaoRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0002-9613-426X
Filip BednarRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-5193-9817
Jiaqi ShiRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-4893-1587
Timothy L FrankelRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-5987-0404
Marina Pasca di MaglianoRogel Cancer Center, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0001-9632-9035
University of Michigan · USGift of Life Michigan · USMemorial Sloan Kettering Cancer Center · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Alexey I Nesvizhskii · 1988 to 2026
$178.2M
VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JOHN C. BYRD · 1988 to 2026
$158.0M
MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
Project 3: Inhibiting Oxidative Phosphorylation in Pancreatic CancerP50CA221707 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KOPETZ, SCOTT, MAITRA, ANIRBAN · 2019 to 2023
$11.0M
RESEARCH TRAINING IN EXPERIMENTAL IMMUNOPATHOLOGYT32AI007413 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Bethany B. Moore · 1993 to 2026
$9.8M
Tumor Microenvironment Crosstalk Drives Early Lesions in Pancreatic CancerU54CA274371 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI ANIRBAN MAITRA · 2022 to 2026
$9.5M
Fibroblast orchestration of the immune response in pancreatic cancerU01CA274154 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Howard C. Crawford, Timothy Louis Frankel · 2022 to 2026
$4.2M
Synthesizing Image-derived Heterogeneity with Genomic measurements for Assessing Disease Aggressiveness in Lower Grade GliomasR37CA214955 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KURTEK, SEBASTIAN, RAO, ARVIND · 2018 to 2024
$3.9M
Training in Basic and Translational Digestive SciencesT32DK094775 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI JOHN Y KAO, LINDA C. SAMUELSON · 2012 to 2026
$3.6M
Targeting the fibroblast-immune cell crosstalk to relieve immune suppression in the pancreatic cancer microenvironmentR01CA260752 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PASCA DI MAGLIANO, MARINA · 2022 to 2025
$2.8M
Dissecting the role of Notch signaling in the pancreatic cancer microenvironment.R01CA271510 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Filip Bednar, Marina Pasca Di Magliano · 2022 to 2026
$2.6M
BLRD VA I01 BX005777BLRD VA IK2 BX005875NCI NIH HHS F31 CA265085NCI NIH HHS K08 CA234222NCI NIH HHS P30 CA008748NCI NIH HHS P30 CA046592NCI NIH HHS P30 CA047904NCI NIH HHS P50 CA221707NCI NIH HHS R01 CA260752NCI NIH HHS R01 CA268426NCI NIH HHS R01 CA271510NCI NIH HHS R37 CA214955NCI NIH HHS R37 CA262209NCI NIH HHS R50 CA232985NCI NIH HHS U01 CA224145NCI NIH HHS U01 CA274154NCI NIH HHS U54 CA274371NIAID NIH HHS T32 AI007413NIDDK NIH HHS R01 DK128102NIDDK NIH HHS T32 DK094775NIGMS NIH HHS T32 GM007863NIGMS NIH HHS T32 GM113900NIGMS NIH HHS T32 GM141840
6 · The paper itself

Abstract

The adult healthy human pancreas has been poorly studied given the lack of indication to obtain tissue from the pancreas in the absence of disease and rapid postmortem degradation. We obtained pancreata from brain dead donors, thus avoiding any warm ischemia time. The 30 donors were diverse in age and race and had no known pancreas disease. Histopathologic analysis of the samples revealed pancreatic intraepithelial neoplasia (PanIN) lesions in most individuals irrespective of age. Using a combination of multiplex IHC, single-cell RNA sequencing, and spatial transcriptomics, we provide the first-ever characterization of the unique microenvironment of the adult human pancreas and of sporadic PanIN lesions. We compared healthy pancreata to pancreatic cancer and peritumoral tissue and observed distinct transcriptomic signatures in fibroblasts and, to a lesser extent, macrophages. PanIN epithelial cells from healthy pancreata were remarkably transcriptionally similar to cancer cells, suggesting that neoplastic pathways are initiated early in tumorigenesis. SIGNIFICANCE: Precursor lesions to pancreatic cancer are poorly characterized. We analyzed donor pancreata and discovered that precursor lesions are detected at a much higher rate than the incidence of pancreatic cancer, setting the stage for efforts to elucidate the microenvironmental and cell-intrinsic factors that restrain or, conversely, promote malignant progression. See related commentary by Hoffman and Dougan, p. 1288. This article is highlighted in the In This Issue feature, p. 1275.

Indexed as

Carcinoma in SituCarcinoma, Pancreatic DuctalPancreatic NeoplasmsAdultHumansPancreasTranscriptomeTumor Microenvironment

Identifiers

PMID37021392
PMCPMC10236159
OpenAlexW4362657848

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.