ArticleBMC genomics2023
Insight into the evolutionary and domesticated history of the most widely cultivated mushroom Agaricus bisporus via mitogenome sequences of 361 global strains.
Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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17 citing papers in PubMed.
- Mitogenomics inMicrobial genomics · 2026Article
- Mitochondrial genomes of Dactylogyrus wunderi (Monopisthocotyla: Dactylogyridae): structural features, codon usage patterns, and phylogenetic implications.BMC genomics · 2026Article
- Mitochondrial Graph-Based Pan-Genome Analysis ofInternational journal of molecular sciences · 2026Article
- Comparative Mitogenomics Reveals Intron Dynamics and Mitochondrial Gene Expression Shifts in Domesticated and WildJournal of fungi (Basel, Switzerland) · 2026Article
- Insights into intraspecific variation and genotyping ofIMA fungus · 2026Article
- Complete mitochondrial genomics reveals phylogenetic relationships and mitogenomic features in six ectomycorrhizalFrontiers in microbiology · 2026Article
- Evolutionary insights intoIMA fungus · 2026Article
- Complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2026Article
- Pan-Mitogenome Construction, Intraspecific Variation, and Adaptive Evolution of the Plant Pathogenic FungusBiology · 2025Article
- Pan-genome analysis reveals genomic variations during enoki mushroom domestication, with emphasis on genetic signatures of cap color and stipe length.Journal of advanced research · 2025Article
- Macromycete Edible Fungi as a Functional Poultry Feed Additive: Influence on Health, Welfare, Eggs, and Meat Quality-Review.Molecules (Basel, Switzerland) · 2025Review
- Mitochondrial genome characterization, evolution and intron dynamics of the entomopathogenic genusFrontiers in microbiology · 2025Article
- Comparative and phylogenetic analyses using mitogenomes revealed gene re-arrangement ofIMA fungus · 2025Article
- Wood-loving magic mushrooms from Australia are saprotrophic invaders in the Northern Hemisphere.Fungal systematics and evolution · 2024Article
- Comparative analyses ofComputational and structural biotechnology journal · 2024Article
- Determining Gene Order Patterns in theInternational journal of molecular sciences · 2024Article
- From 'Farm to Fork': Exploring the Potential of Nutrient-Rich and Stress-Resilient Emergent Crops for Sustainable and Healthy Food in the Mediterranean Region in the Face of Climate Change Challenges.Plants (Basel, Switzerland) · 2024Review
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8 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Agaricus bisporus is the most widely cultivated edible mushroom in the world with a only around three hundred years known history of cultivation. Therefore, it represents an ideal organism not only to investigate the natural evolutionary history but also the understanding on the evolution going back to the early era of domestication. In this study, we generated the mitochondrial genome sequences of 352 A. bisporus strains and 9 strains from 4 closely related species around the world. The population mitogenomic study revealed all A. bisporus strains can be divided into seven clades, and all domesticated cultivars present only in two of those clades. The molecular dating analysis showed this species origin in Europe on 4.6 Ma and we proposed the main dispersal routes. The detailed mitogenome structure studies showed that the insertion of the plasmid-derived dpo gene caused a long fragment (MIR) inversion, and the distributions of the fragments of dpo gene were strictly in correspondence with these seven clades. Our studies also showed A. bisporus population contains 30 intron distribution patterns (IDPs), while all cultivars contain only two IDPs, which clearly exhibit intron loss compared to the others. Either the loss occurred before or after domestication, that could suggest that the change facilitates their adaptation to the cultivated environment.
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