Evidence map›Paper›PMID 37020178›Full record

ArticleBMC genomics2023

Comparative analysis of Fusarium crown rot resistance in synthetic hexaploid wheats and their parental genotypes.

Ying Chen, Yunpeng Wang, Fangnian Guan, Li Long, Yuqi Wang, Hao Li, Mei Deng, Yazhou Zhang, Zhien Pu, Wei Li and 13 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 2 institutions in 1 country.

Ying ChenState Key Laboratory of Crop Gene Exploitation and Utilization in Southwest China, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Yunpeng WangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Fangnian GuanTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Li LongTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Yuqi WangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Hao LiTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Mei DengTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Yazhou ZhangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Zhien PuCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Wei LiCollege of Agronomy, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Qiantao JiangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Jirui WangState Key Laboratory of Crop Gene Exploitation and Utilization in Southwest China, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Yuming WeiState Key Laboratory of Crop Gene Exploitation and Utilization in Southwest China, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Jian MaTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Qiang XuTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Houyang KangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Pengfei QiTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Zhongwei YuanTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Lianquan ZhangState Key Laboratory of Crop Gene Exploitation and Utilization in Southwest China, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Dengcai LiuState Key Laboratory of Crop Gene Exploitation and Utilization in Southwest China, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Youliang ZhengTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China.
Guoyue ChenTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China. gychen@sicau.edu.cn.
Yunfeng JiangTriticeae Research Institute, Sichuan Agricultural University, Wenjiang, Chengdu, 611130, Sichuan, P. R. China. jiangyunfeng@sicau.edu.cn.
Sichuan Agricultural University · CNState Key Laboratory of Oil and Gas Reservoir Geology and Exploitation · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFusarium crown rot (FCR) is a chronic disease of cereals worldwide. Compared with tetraploid wheat, hexaploid wheat is more resistant to FCR infection. The underlying reasons for the differences are still not clear. In this study, we compared FCR responses of 10 synthetic hexaploid wheats (SHWs) and their tetraploid and diploid parents. We then performed transcriptome analysis to uncover the molecular mechanism of FCR on these SHWs and their parents.

resultsWe observed higher levels of FCR resistance in the SHWs compared with their tetraploid parents. The transcriptome analysis suggested that multiple defense pathways responsive to FCR infection were upregulated in the SHWs. Notably, phenylalanine ammonia lyase (PAL) genes, involved in lignin and salicylic acid (SA) biosynthesis, exhibited a higher level of expression to FCR infection in the SHWs. Physiological and biochemical analysis validated that PAL activity and SA and lignin contents of the stem bases were higher in SHWs than in their tetraploid parents.

conclusionOverall, these findings imply that improved FCR resistance in SHWs compared with their tetraploid parents is probably related to higher levels of response on PAL-mediated lignin and SA biosynthesis pathways.

Indexed as

FusariumDisease ResistanceGenotypeLigninPlant DiseasesPoaceaeTetraploidyLigninFusarium crown rotPhenylalanine ammonia-lyaseSynthetic hexaploid wheatTranscriptome

Identifiers

PMID37020178
PMCPMC10077658
OpenAlexW4362604556

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.