Evidence map›Paper›PMID 37019105›Full record

ArticleCell stem cell2023

Generation of ventralized human thalamic organoids with thalamic reticular nucleus.

Ferdi Ridvan Kiral, Bilal Cakir, Yoshiaki Tanaka, Jonghun Kim, Woo Sub Yang, Fabien Wehbe, Young-Jin Kang, Mei Zhong, Gizem Sancer, Sang-Hun Lee and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 50 citations in OpenAlex.

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  18. Human Brain Organoids: Development and Applications.Journal of microbiology and biotechnology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Ferdi Ridvan KiralDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Bilal CakirDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Yoshiaki TanakaDepartment of Medicine, Maisonneuve-Rosemont Hospital Research Centre, University of Montreal, Montreal, QC H1T 2M4, Canada.
Jonghun KimDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Woo Sub YangDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Fabien WehbeDepartment of Medicine, Maisonneuve-Rosemont Hospital Research Centre, University of Montreal, Montreal, QC H1T 2M4, Canada.
Young-Jin KangDepartment of Biomedical Sciences, Colorado State University, Fort Collins, CO 80523, USA.
Mei ZhongDepartment of Cell Biology, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Gizem SancerDepartment of Neuroscience, Yale School of Medicine, New Haven, CT 06510, USA.
Sang-Hun LeeDepartment of Biomedical Sciences, Colorado State University, Fort Collins, CO 80523, USA.
Yangfei XiangSchool of Life Science and Technology, ShanghaiTech University, Shanghai 201210, China. Electronic address: xiangyf@shanghaitech.edu.cn.
In-Hyun ParkDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA. Electronic address: inhyun.park@yale.edu.
Yale Cancer Center · USColorado State University · USHôpital Maisonneuve-Rosemont · CAShanghaiTech University · CNYale University · US

Funding

Construction of the integrated human forebrain organoids to investigate neurodevelopmental disordersR01MH118344 · NIMH · YALE UNIVERSITY · PI In-Hyun Park · 2019 to 2026
$4.0M
Functional analysis of autism risk genes during neural development using single cell seqR01MH118554 · NIMH · YALE UNIVERSITY · PI GIRALDEZ, ANTONIO J · 2019 to 2023
$3.0M
NIMH NIH HHS R01 MH118344NIMH NIH HHS R01 MH118554
6 · The paper itself

Abstract

Human brain organoids provide unique platforms for modeling several aspects of human brain development and pathology. However, current brain organoid systems mostly lack the resolution to recapitulate the development of finer brain structures with subregional identity, including functionally distinct nuclei in the thalamus. Here, we report a method for converting human embryonic stem cells (hESCs) into ventral thalamic organoids (vThOs) with transcriptionally diverse nuclei identities. Notably, single-cell RNA sequencing revealed previously unachieved thalamic patterning with a thalamic reticular nucleus (TRN) signature, a GABAergic nucleus located in the ventral thalamus. Using vThOs, we explored the functions of TRN-specific, disease-associated genes patched domain containing 1 (PTCHD1) and receptor tyrosine-protein kinase (ERBB4) during human thalamic development. Perturbations in PTCHD1 or ERBB4 impaired neuronal functions in vThOs, albeit not affecting the overall thalamic lineage development. Together, vThOs present an experimental model for understanding nuclei-specific development and pathology in the thalamus of the human brain.

Indexed as

Thalamic NucleiThalamusHumansNeuronsOrganoids3-D organoidsbrain organoidERBB4hESCPTCHD1stem cellsthalamic organoidthalamic reticular nucleusTRNventral thalamic organoids

Identifiers

PMID37019105
PMCPMC10329908
OpenAlexW4362603394

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.