Evidence map›Paper›PMID 37018982›Full record

ArticleDNA repair2023

Corruption of DNA end-joining in mammalian chromosomes by progerin expression.

Liza A Joudeh, Alannah J DiCintio, Madeline R Ries, Andrew S Gasperson, Kennedy E Griffin, Victoria P Robbins, Makenzie Bonner, Sarah Nolan, Emma Black, Alan S Waldman

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
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  7. Review
  8. The impact of alterations in lamin A on genome integrity.Mutation research. Reviews in mutation research
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Liza A JoudehDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Alannah J DiCintioDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Madeline R RiesDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Andrew S GaspersonDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Kennedy E GriffinDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Victoria P RobbinsDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Makenzie BonnerDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Sarah NolanDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Emma BlackDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.
Alan S WaldmanDepartment of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA. Electronic address: awaldman@biol.sc.edu.
University of South Carolina · US

Funding

Lamin A and the Fidelity of DNA Double-Strand Break RepairR03AG064525 · NIA · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI WALDMAN, ALAN S. · 2020 to 2021
$149k
NIA NIH HHS R03 AG064525
6 · The paper itself

Abstract

Hutchinson-Gilford Progeria Syndrome (HGPS) is a rare genetic condition characterized by features of accelerated aging and a life expectancy of about 14 years. HGPS is commonly caused by a point mutation in the LMNA gene which codes for lamin A, an essential component of the nuclear lamina. The HGPS mutation alters splicing of the LMNA transcript, leading to a truncated, farnesylated form of lamin A termed "progerin." Progerin is also produced in small amounts in healthy individuals by alternative splicing of RNA and has been implicated in normal aging. HGPS is associated with an accumulation of genomic DNA double-strand breaks (DSBs), suggesting alteration of DNA repair. DSB repair normally occurs by either homologous recombination (HR), an accurate, templated form of repair, or by nonhomologous end-joining (NHEJ), a non-templated rejoining of DNA ends that can be error-prone; however a good portion of NHEJ events occurs precisely with no alteration to joined sequences. Previously, we reported that over-expression of progerin correlated with increased NHEJ relative to HR. We now report on progerin's impact on the nature of DNA end-joining. We used a model system involving a DNA end-joining reporter substrate integrated into the genome of cultured thymidine kinase-deficient mouse fibroblasts. Some cells were engineered to express progerin. Two closely spaced DSBs were induced in the integrated substrate through expression of endonuclease I-SceI, and DSB repair events were recovered through selection for thymidine kinase function. DNA sequencing revealed that progerin expression correlated with a significant shift away from precise end-joining between the two I-SceI sites and toward imprecise end-joining. Additional experiments revealed that progerin did not reduce HR fidelity. Our work suggests that progerin suppresses interactions between complementary sequences at DNA termini, thereby shifting DSB repair toward low-fidelity DNA end-joining and perhaps contributing to accelerated and normal aging through compromised genome stability.

Indexed as

Lamin Type AProgeriaAnimalsChromosomes, MammalianDNAMammalsMiceThymidine KinaseDNALamin Type AThymidine KinaseDNA double-strand break repairGenomic instabilityHutchinson-Gilford Progeria SyndromeProgerin

Identifiers

PMID37018982
PMCPMC10133198
OpenAlexW4362586455

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.