Evidence map›Paper›PMID 37018380›Full record

ArticlePLoS pathogens2023

Cryo-EM structures and binding of mouse and human ACE2 to SARS-CoV-2 variants of concern indicate that mutations enabling immune escape could expand host range.

Dongchun Ni, Priscilla Turelli, Bertrand Beckert, Sergey Nazarov, Emiko Uchikawa, Alexander Myasnikov, Florence Pojer, Didier Trono, Henning Stahlberg, Kelvin Lau

Abstract read
In one paragraph

Article in PLoS pathogens, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Dongchun NiLaboratory of Biological Electron Microscopy (LBEM), Institute of Physics, School of Basic Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Priscilla TurelliLaboratory of Virology and Genetics (LVG), School of Life Sciences, École polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Bertrand BeckertDubochet Center for Imaging (DCI), École polytechnique Fédérale de Lausanne (EPFL) and University of Lausanne, Lausanne, Switzerland.
Sergey NazarovDubochet Center for Imaging (DCI), École polytechnique Fédérale de Lausanne (EPFL) and University of Lausanne, Lausanne, Switzerland.
Emiko UchikawaDubochet Center for Imaging (DCI), École polytechnique Fédérale de Lausanne (EPFL) and University of Lausanne, Lausanne, Switzerland.
Alexander MyasnikovDubochet Center for Imaging (DCI), École polytechnique Fédérale de Lausanne (EPFL) and University of Lausanne, Lausanne, Switzerland.
Florence PojerProtein Production and Structure Characterization Core Facility (PTPSP), School of Life Sciences, École polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Didier TronoLaboratory of Virology and Genetics (LVG), School of Life Sciences, École polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Henning StahlbergLaboratory of Biological Electron Microscopy (LBEM), Institute of Physics, School of Basic Science, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
Kelvin LauProtein Production and Structure Characterization Core Facility (PTPSP), School of Life Sciences, École polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.ORCID 0000-0002-9040-7597

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Investigation of potential hosts of the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) is crucial to understanding future risks of spillover and spillback. SARS-CoV-2 has been reported to be transmitted from humans to various animals after requiring relatively few mutations. There is significant interest in describing how the virus interacts with mice as they are well adapted to human environments, are used widely as infection models and can be infected. Structural and binding data of the mouse ACE2 receptor with the Spike protein of newly identified SARS-CoV-2 variants are needed to better understand the impact of immune system evading mutations present in variants of concern (VOC). Previous studies have developed mouse-adapted variants and identified residues critical for binding to heterologous ACE2 receptors. Here we report the cryo-EM structures of mouse ACE2 bound to trimeric Spike ectodomains of four different VOC: Beta, Omicron BA.1, Omicron BA.2.12.1 and Omicron BA.4/5. These variants represent the oldest to the newest variants known to bind the mouse ACE2 receptor. Our high-resolution structural data complemented with bio-layer interferometry (BLI) binding assays reveal a requirement for a combination of mutations in the Spike protein that enable binding to the mouse ACE2 receptor.

Indexed as

COVID-19SARS-CoV-2Angiotensin-Converting Enzyme 2AnimalsCryoelectron MicroscopyHost SpecificityHumansMutationProtein BindingSpike Glycoprotein, CoronavirusACE2 protein, humanAce2 protein, mouseAngiotensin-Converting Enzyme 2Spike Glycoprotein, Coronavirusspike protein, SARS-CoV-2

Identifiers

PMID37018380
PMCPMC10109501

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.