ArticleProceedings of the National Academy of Sciences of the United States of America2023
Cofunctioning of bacterial exometabolites drives root microbiota establishment.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.
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Who cites it
41 citing papers in PubMed, 75 citations in OpenAlex.
- Carbohydrate-active enzymes from a core root mycobiota member enable infection of multiple plant hosts.Nature microbiology · 2026Article
- Towards an Omics-Guided Framework for Microbial Biological Control of Fungal and Oomycete Diseases inInternational journal of molecular sciences · 2026Review
- Synthetic microbial communities for studying the fate and ecological role of specialized metabolites.Essays in biochemistry · 2026Review
- The metabolic and anatomical complexity of root microhabitats modulate their interaction with the microbiota.Nature communications · 2026Article
- Steering root-associated microbiomes via direct and soil legacy effects of neighbors.Microbiome · 2026Article
- A plant-microbe treaty: coordinated action of plant and microbial proteins strengthens immunity in apple.Plant physiology · 2026Article
- Advancing Plant Microbiome Research Through Host DNA Depletion Techniques.Plant biotechnology journal · 2026Review
- Mechanistic Insights for Microbiome Application in Plant Disease Resistance.Molecular plant pathology · 2026Review
- Enrichment is not necessarily recruitment in root microbiome assembly.The ISME journal · 2026Review
- From natural assemblages to synthetic communities in theFrontiers in plant science · 2026Article
- Transcriptome-guided discovery of novel plant-associated genes in a rhizosphere Pseudomonas.Microbiome · 2025Article
- Key Challenges in Plant Microbiome Research in the Next Decade.Microorganisms · 2025Review
- In Silico Prediction and In Vitro Validation of Bacterial Interactions in the Plant Rhizosphere Using a Synthetic Bacterial Community.Bio-protocol · 2025Article
- Potential and challenges for application of microbiomes in agriculture.The Plant cell · 2025Review
- Quorum sensing modulates microbial community structure through regulation of secondary metabolites.mSphere · 2025Article
- Pseudomonas intra-genus competition determines the protective function of synthetic bacterial communities in Arabidopsis thaliana.PLoS biology · 2025Article
- Bacterial community-emitted volatiles regulate Arabidopsis growth and root architecture in a distinct manner of those from individual strains.Plant communications · 2025Article
- Effects of Cadmium Stress on Root Exudates and Soil Rhizosphere Microorganisms of Rice (Plants (Basel, Switzerland) · 2025Article
- Interactions with native microbial keystone taxa enhance the biocontrol efficiency of Streptomyces.Microbiome · 2025Article
- MetaFlowTrain: a highly parallelized and modular fluidic system for studying exometabolite-mediated inter-organismal interactions.Nature communications · 2025Article
Corrections and comments
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Authors and funding
20 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Soil-dwelling microbes are the principal inoculum for the root microbiota, but our understanding of microbe-microbe interactions in microbiota establishment remains fragmentary. We tested 39,204 binary interbacterial interactions for inhibitory activities in vitro, allowing us to identify taxonomic signatures in bacterial inhibition profiles. Using genetic and metabolomic approaches, we identified the antimicrobial 2,4-diacetylphloroglucinol (DAPG) and the iron chelator pyoverdine as exometabolites whose combined functions explain most of the inhibitory activity of the strongly antagonistic
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.