Evidence map›Paper›PMID 37017574›Full record

ArticlemSphere2023

A Transducing Bacteriophage Infecting Staphylococcus epidermidis Contributes to the Expansion of a Novel Siphovirus Genus and Implies the Genus Is Inappropriate for Phage Therapy.

Taylor Andrews, J Steen Hoyer, Karolyn Ficken, Paul D Fey, Siobain Duffy, Jeffrey M Boyd

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Complete genome sequences ofMicrobiology resource announcements · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Taylor AndrewsDepartment of Biochemistry and Microbiology, Rutgers University, New Brunswick, New Jersey, USA.ORCID 0000-0001-7852-219X
J Steen HoyerDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, New Brunswick, New Jersey, USA.ORCID 0000-0002-1338-8900
Karolyn FickenDepartment of Biochemistry and Microbiology, Rutgers University, New Brunswick, New Jersey, USA.
Paul D FeyUniversity of Nebraska Medical Center, University of Nebraska, Omaha, Nebraska, USA.ORCID 0000-0003-0939-6884
Siobain DuffyDepartment of Ecology, Evolution, and Natural Resources, Rutgers University, New Brunswick, New Jersey, USA.ORCID 0000-0003-0753-223X
Jeffrey M BoydDepartment of Biochemistry and Microbiology, Rutgers University, New Brunswick, New Jersey, USA.ORCID 0000-0001-7721-3926
Rutgers, The State University of New Jersey · USUniversity of Nebraska Medical Center · US

Funding

IMSD at Rutgers - New Brunswick (Renewal)T32GM139804 · NIGMS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI Brian Daniels, JAMES H. MILLONIG · 2021 to 2026
$2.9M
Mechanisms of cellular respiration-dependent cell lysis and its impact on biofilm formation and disassembly in Staphylococcus aureus.R01AI139100 · NIAID · RUTGERS, THE STATE UNIV OF N.J. · PI BOYD, JEFF M · 2018 to 2022
$1.9M
NIAID NIH HHS R01 AI139100NIGMS NIH HHS T32 GM139804
6 · The paper itself

Abstract

The effort to discover novel phages infecting Staphylococcus epidermidis contributes to both the development of phage therapy and the expansion of genome-based phage phylogeny. Here, we report the genome of an S. epidermidis-infecting phage, Lacachita, and compare its genome with those of five other phages with high sequence identity. These phages represent a novel siphovirus genus, which was recently reported in the literature. The published member of this group was favorably evaluated as a phage therapeutic agent, but Lacachita is capable of transducing antibiotic resistance and conferring phage resistance to transduced cells. Members of this genus may be maintained within their host as extrachromosomal plasmid prophages, through stable lysogeny or pseudolysogeny. Therefore, we conclude that Lacachita may be temperate and members of this novel genus are not suitable for phage therapy.

Indexed as

BacteriophagesPhage TherapyGenome, ViralLysogenyStaphylococcus epidermidisbacteriophage geneticsbacteriophage therapyextrachromosomal prophageStaphylococcus epidermidis

Identifiers

PMID37017574
PMCPMC10286716
OpenAlexW4362601689

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.