Evidence map›Paper›PMID 37016457›Full record

ArticleBiotechnology for biofuels and bioproducts2023

Biochemical and structural characterisation of a family GH5 cellulase from endosymbiont of shipworm P. megotara.

Madan Junghare, Tamilvendan Manavalan, Lasse Fredriksen, Ingar Leiros, Bjørn Altermark, Vincent G H Eijsink, Gustav Vaaje-Kolstad

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Production of High-Value Antibiotics byACS sustainable chemistry & engineering · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Madan JunghareDepartment of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432, Ås, Norway. madan.junghare@nmbu.no.
Tamilvendan ManavalanDepartment of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432, Ås, Norway.
Lasse FredriksenDepartment of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432, Ås, Norway.
Ingar LeirosThe Norwegian Structural Biology Centre, Department of Chemistry, The Arctic University of Norway, 9037, Tromsø, Norway.
Bjørn AltermarkThe Norwegian Structural Biology Centre, Department of Chemistry, The Arctic University of Norway, 9037, Tromsø, Norway.
Vincent G H EijsinkDepartment of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432, Ås, Norway.
Gustav Vaaje-KolstadDepartment of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432, Ås, Norway. gustav.vaaje-kolstad@nmbu.no.

Funding

Norges Forskningsråd 221568Norges Forskningsråd 269408Norges Forskningsråd 283647
6 · The paper itself

Abstract

backgroundCellulases play a key role in the enzymatic conversion of plant cell-wall polysaccharides into simple and economically relevant sugars. Thus, the discovery of novel cellulases from exotic biological niches is of great interest as they may present properties that are valuable in the biorefining of lignocellulosic biomass.

resultsWe have characterized a glycoside hydrolase 5 (GH5) domain of a bi-catalytic GH5-GH6 multi-domain enzyme from the unusual gill endosymbiont Teredinibacter waterburyi of the wood-digesting shipworm Psiloteredo megotara. The catalytic GH5 domain, was cloned and recombinantly produced with or without a C-terminal family 10 carbohydrate-binding module (CBM). Both variants showed hydrolytic endo-activity on soluble substrates such as β-glucan, carboxymethylcellulose and konjac glucomannan, respectively. However, low activity was observed towards the crystalline form of cellulose. Interestingly, when co-incubated with a cellulose-active LPMO, a clear synergy was observed that boosted the overall hydrolysis of crystalline cellulose. The crystal structure of the GH5 catalytic domain was solved to 1.0 Å resolution and revealed a substrate binding cleft extension containing a putative + 3 subsite, which is uncommon in this enzyme family. The enzyme was active in a wide range of pH, temperatures and showed high tolerance for NaCl.

conclusionsThis study provides significant knowledge in the discovery of new enzymes from shipworm gill endosymbionts and sheds new light on biochemical and structural characterization of cellulolytic cellulase. Study demonstrated a boost in the hydrolytic activity of cellulase on crystalline cellulose when co-incubated with cellulose-active LPMO. These findings will be relevant for the development of future enzyme cocktails that may be useful for the biotechnological conversion of lignocellulose.

Indexed as

Endo/exo-1–4-β-glucanaseEndosymbiontEnzymatic hydrolysisGH family 5Shipwormβ-glucan barely

Identifiers

PMID37016457
PMCPMC10071621

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.