Evidence map›Paper›PMID 37015227›Full record

ArticleStructure (London, England : 1993)2023

Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact α-carboxysome.

Sasha L Evans, Monsour M J Al-Hazeem, Daniel Mann, Nicolas Smetacek, Andrew J Beavil, Yaqi Sun, Taiyu Chen, Gregory F Dykes, Lu-Ning Liu, Julien R C Bergeron

Abstract read
In one paragraph

Article in Structure (London, England : 1993), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
  3. Functional and structural insights into cyanobacterial COThe Plant journal : for cell and molecular biology · 2026
    Review
  4. Architectural and biochemical advances in understanding microbial COThe Plant journal : for cell and molecular biology · 2026
    Review
  5. Review
  6. Structure and encapsulation of carbonic anhydrase within the α-carboxysome.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Cryo-EM single-particle analysis expanding towards increasingly native samples.Acta crystallographica. Section D, Structural biology · 2025
    Review
  8. Article
  9. Review
  10. Article
  11. In-cell Structure and Variability of Pyrenoid Rubisco.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. Article
  14. Atomic view of photosynthetic metabolite permeability pathways and confinement in synthetic carboxysome shells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
  17. IntegrativemSystems · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Sasha L EvansRandall Centre for Cell and Molecular Biophysics, King's College London, London, UK.
Monsour M J Al-HazeemInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Daniel MannErnst-Ruska Centre 3, Forschungszentrum Jülich, Jülich, Germany.
Nicolas SmetacekDepartment of Molecular Biology and Biotechnology, The University of Sheffield, Sheffield, UK.
Andrew J BeavilRandall Centre for Cell and Molecular Biophysics, King's College London, London, UK.
Yaqi SunInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Taiyu ChenInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Gregory F DykesInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Lu-Ning LiuInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK; College of Marine Life Sciences, and Frontiers Science Center for Deep Ocean Multispheres and Earth System, Ocean University of China, Qingdao, Shandong, China. Electronic address: luning.liu@liverpool.ac.uk.
Julien R C BergeronRandall Centre for Cell and Molecular Biophysics, King's College London, London, UK; Department of Molecular Biology and Biotechnology, The University of Sheffield, Sheffield, UK. Electronic address: julien.bergeron@kcl.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/M024202/1Biotechnology and Biological Sciences Research Council BB/R003890/1Biotechnology and Biological Sciences Research Council BB/R019061/2Biotechnology and Biological Sciences Research Council BB/V009729/1
6 · The paper itself

Abstract

Carboxysomes are proteinaceous bacterial microcompartments that sequester the key enzymes for carbon fixation in cyanobacteria and some proteobacteria. They consist of a virus-like icosahedral shell, encapsulating several enzymes, including ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO), responsible for the first step of the Calvin-Benson-Bassham cycle. Despite their significance in carbon fixation and great bioengineering potentials, the structural understanding of native carboxysomes is currently limited to low-resolution studies. Here, we report the characterization of a native α-carboxysome from a marine cyanobacterium by single-particle cryoelectron microscopy (cryo-EM). We have determined the structure of its RuBisCO enzyme, and obtained low-resolution maps of its icosahedral shell, and of its concentric interior organization. Using integrative modeling approaches, we have proposed a complete atomic model of an intact carboxysome, providing insight into its organization and assembly. This is critical for a better understanding of the carbon fixation mechanism and toward repurposing carboxysomes in synthetic biology for biotechnological applications.

Indexed as

CyanobacteriaRibulose-Bisphosphate CarboxylaseBacterial ProteinsCryoelectron MicroscopyOrganellesPhotosynthesisBacterial ProteinsRibulose-Bisphosphate Carboxylasecarboxysomecryo-EMcyanobacteriaphotosynthesis

Identifiers

PMID37015227
PMCPMC10689251

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.