Evidence map›Paper›PMID 37013377›Full record

ArticleVeterinary medicine and science2023

Development of a highly sensitive point-of-care test for African swine fever that combines EZ-Fast DNA extraction with LAMP detection: Evaluation using naturally infected swine whole blood samples from Vietnam.

Mai Thi Ngan, Huynh Thi My Le, Vu Xuan Dang, Trinh Thi Bich Ngoc, Le Van Phan, Nguyen Thi Hoa, Truong Quang Lam, Nguyen Thi Lan, Kosuke Notsu, Satoshi Sekiguchi and 2 more

Open access · goldAbstract read
In one paragraph

Article in Veterinary medicine and science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Mai Thi NganFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Huynh Thi My LeFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Vu Xuan DangFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Trinh Thi Bich NgocFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Le Van PhanFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Nguyen Thi HoaFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Truong Quang LamFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.ORCID 0000-0002-9403-2614
Nguyen Thi LanFaculty of Veterinary Medicine, Vietnam National University of Agriculture, Hanoi, Vietnam.
Kosuke NotsuGraduate School of Medicine and Veterinary Medicine, University of Miyazaki, Miyazaki, Japan.ORCID 0000-0002-9152-471X
Satoshi SekiguchiDepartment of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan.ORCID 0000-0003-2066-128X
Yasuko YamazakiCenter for Southeast Asian Studies, Kyoto University, Kyoto, Japan.
Wataru YamazakiCenter for Southeast Asian Studies, Kyoto University, Kyoto, Japan.ORCID 0000-0002-7874-8014
Vietnam National University of Agriculture · VNKyoto University · JPUniversity of Miyazaki · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundWhile early detection and early containment are key to controlling the African swine fever (ASF) pandemic, the lack of practical testing methods for use in the field are a major barrier to achieving this feat.

objectivesTo describe the development of a rapid and sensitive point-of-care test (POCT) for ASF, and its evaluation using swine whole blood samples for field settings.

methodsIn total, 89 swine whole blood samples were collected from Vietnamese swine farms and were performed the POCT using a combination of crude DNA extraction and LAMP (loop-mediated isothermal amplification) amplification.

resultsThe POCT enabled crude DNA to be extracted from swine whole blood samples within 10 min at extremely low cost and with relative ease. The entire POCT required a maximum of 50 min from the beginning of DNA extraction to final judgment. Compared to a conventional real-time PCR detection, the POCT showed a 1 log reduction in detection sensitivity, but comparable diagnostic sensitivity of 100% (56/56) and diagnostic specificity of 100% (33/33). The POCT was quicker and easier to perform and did not require special equipment.

conclusionsThis POCT is expected to facilitate early diagnosis and containment of ASF invasion into both regions in which it is endemic and eradicated.

Indexed as

African Swine FeverAfrican Swine Fever VirusSwine DiseasesAnimalsDNA, ViralPoint-of-Care TestingSwineVietnamDNA, ViralAfrican swine feverEZ-Fastfield settingloop-mediated isothermal amplificationpoint-of-care test

Identifiers

PMID37013377
PMCPMC10188095
OpenAlexW4362523243

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.