Evidence map›Paper›PMID 37011237›Full record

ArticleMedical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention2022

From Images to Probabilistic Anatomical Shapes: A Deep Variational Bottleneck Approach.

Jadie Adams, Shireen Elhabian

Abstract read
In one paragraph

Article in Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Probabilistic 3D Correspondence Prediction from Sparse Unsegmented Images.Machine learning in medical imaging. MLMI (Workshop) · 2025
    Article
  2. Weakly Supervised Bayesian Shape Modeling from Unsegmented Medical Images.Shape in medical imaging : International Workshop, ShapeMI 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 6, 2024, Proceedings. ShapeMI (Workshop) (2024 : Marrakech, Morocco) · 2025
    Article
  3. MASSM: An End-to-End Deep Learning Framework for Multi-Anatomy Statistical Shape Modeling Directly From Images.Shape in medical imaging : International Workshop, ShapeMI 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 6, 2024, Proceedings. ShapeMI (Workshop) (2024 : Marrakech, Morocco) · 2025
    Article
  4. SCorP: Statistics-Informed Dense Correspondence Prediction Directly from Unsegmented Medical Images.Medical Image Understanding and Analysis. Medical Image Understanding and Analysis (Conference) · 2024
    Article
  5. OPTIMIZATION-DRIVEN STATISTICAL MODELS OF ANATOMIES USING RADIAL BASIS FUNCTION SHAPE REPRESENTATION.Proceedings. IEEE International Symposium on Biomedical Imaging · 2024
    Article
  6. Can point cloud networks learn statistical shape models of anatomies?Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  7. Mesh2SSM: From Surface Meshes to Statistical Shape Models of Anatomy.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  8. Fully Bayesian VIB-DeepSSM.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  9. Image2SSM: Reimagining Statistical Shape Models from Images with Radial Basis Functions.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  10. ADASSM: Adversarial Data Augmentation in Statistical Shape Models From Images.Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.) · 2023
    Article
  11. Progressive DeepSSM: Training Methodology for Image-To-Shape Deep Models.Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jadie AdamsScientific Computing and Imaging Institute, University of Utah, UT, USA.
Shireen ElhabianScientific Computing and Imaging Institute, University of Utah, UT, USA.

Funding

TRD - VisualizationP41GM103545 · NIGMS · UNIVERSITY OF UTAH · PI JURRUS, ELIZABETH · 2012 to 2019
$9.7M
Population-Based Shape and Biomechanical Analysis of Hip PathoanatomyR01EB016701 · NIBIB · UNIVERSITY OF UTAH · PI ANDERSON, ANDREW EDWARD · 2013 to 2023
$3.6M
ShapeWorks in the CloudR01AR076120 · NIAMS · UNIVERSITY OF UTAH · PI ELHABIAN, SHIREEN YOUSSEF · 2019 to 2024
$2.7M
New 3D and 4D Image-Based Clinical Measures of Atrial Structural and Functional Remodeling in Atrial FibrillationR01HL135568 · NHLBI · UNIVERSITY OF UTAH · PI CATES, JOSHUA E, ELHABIAN, SHIREEN YOUSSEF · 2017 to 2020
$1.4M
ShapeWorksStudio: An Integrative, User-Friendly, and Scalable Suite for Shape Representation and AnalysisU24EB029011 · NIBIB · UNIVERSITY OF UTAH · PI ELHABIAN, SHIREEN YOUSSEF · 2019 to 2023
$1.4M
NHLBI NIH HHS R01 HL135568NIAMS NIH HHS R01 AR076120NIBIB NIH HHS R01 EB016701NIBIB NIH HHS U24 EB029011NIGMS NIH HHS P41 GM103545
6 · The paper itself

Abstract

Statistical shape modeling (SSM) directly from 3D medical images is an underutilized tool for detecting pathology, diagnosing disease, and conducting population-level morphology analysis. Deep learning frameworks have increased the feasibility of adopting SSM in medical practice by reducing the expert-driven manual and computational overhead in traditional SSM workflows. However, translating such frameworks to clinical practice requires calibrated uncertainty measures as neural networks can produce over-confident predictions that cannot be trusted in sensitive clinical decision-making. Existing techniques for predicting shape with aleatoric (data-dependent) uncertainty utilize a principal component analysis (PCA) based shape representation computed in isolation of the model training. This constraint restricts the learning task to solely estimating pre-defined shape descriptors from 3D images and imposes a linear relationship between this shape representation and the output (i.e., shape) space. In this paper, we propose a principled framework based on the variational information bottleneck theory to relax these assumptions while predicting probabilistic shapes of anatomy directly from images without supervised encoding of shape descriptors. Here, the latent representation is learned in the context of the learning task, resulting in a more scalable, flexible model that better captures data non-linearity. Additionally, this model is self-regularized and generalizes better given limited training data. Our experiments demonstrate that the proposed method provides an accuracy improvement and better calibrated aleatoric uncertainty estimates than state-of-the-art methods.

Indexed as

Bayesian Deep LearningStatistical Shape ModelingUncertainty Quantification

Identifiers

PMID37011237
PMCPMC10063212

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.