Evidence map›Paper›PMID 37010714›Full record

ArticleBiochemical genetics2023

Identification of Bone Metastatic and Prognostic Alternative Splicing Signatures in Prostate Adenocarcinoma.

Jiwen Zhu, Jiayao Zhang, Peng Hu, Mingxiang Fan, Dianwen Song, Huabin Yin, Penghui Yan, Shuyuan Xian, Zhenyu Li, Juanru Guo and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Biochemical genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Jiwen ZhuDepartment of Orthopedics, The First Affiliated Hospital of Zhengzhou University, 1 East Jianshe Road, Zhengzhou, 450052, China.
Jiayao Zhang *School of Mathematical Sciences of Tongji University, Shanghai, 200092, China.
Peng Hu *Department of Orthopedics, The First Affiliated Hospital of Zhengzhou University, 1 East Jianshe Road, Zhengzhou, 450052, China.
Mingxiang FanTongji University School of Medicine, Shanghai, 200092, China.
Dianwen SongDepartment of Orthopedics, School of Medicine, Shanghai General Hospital, Shanghai Jiaotong University, 100 Haining Road, Shanghai, 200065, China.
Huabin YinDepartment of Orthopedics, School of Medicine, Shanghai General Hospital, Shanghai Jiaotong University, 100 Haining Road, Shanghai, 200065, China.
Penghui YanDepartment of Orthopedics, The First Affiliated Hospital of Zhengzhou University, 1 East Jianshe Road, Zhengzhou, 450052, China.
Shuyuan XianTongji University School of Medicine, Shanghai, 200092, China.
Zhenyu LiTongji University School of Medicine, Shanghai, 200092, China.
Juanru GuoSchool of Mathematical Sciences of Tongji University, Shanghai, 200092, China.
Chunling LongTongji University School of Medicine, Shanghai, 200092, China.
Runping XuTongji University School of Medicine, Shanghai, 200092, China.
Runzhi Huang *Department of Orthopedics, The First Affiliated Hospital of Zhengzhou University, 1 East Jianshe Road, Zhengzhou, 450052, China. 1810938@tongji.edu.cn.
Tong MengDivision of Spine, Department of Orthopedics, Tongji Hospital affiliated to Tongji University School of Medicine, Shanghai, 200065, China. mengtong@medmail.com.cn.
Jie ZhangTongji University School of Medicine, Shanghai, 200092, China. jiezhang@tongji.edu.cn.
Zongqiang HuangDepartment of Orthopedics, The First Affiliated Hospital of Zhengzhou University, 1 East Jianshe Road, Zhengzhou, 450052, China. gzhuangzq@163.com.ORCID http://orcid.org/0000-0002-2787-1629
Tongji University · CNFirst Affiliated Hospital of Zhengzhou University · CNShanghai First People's Hospital · CN

Funding

henan medical science and technology research project No. 201602031national natural science foundation of china Grant No. 81501203national natural science foundation of china Grant No. 81702659national natural science foundation of china Grant No. 81772856shanghai municipal health commission No.201940306youth fund of shanghai municipal health planning commission No.2017YQ054
6 · The paper itself

Abstract

As the most common nonepithelial malignancy, prostate adenocarcinoma (PRAD) is the fifth chief cause of cancer mortality in men. Distant metastasis often occurs in advanced PRAD and most patients are dying from it. However, the mechanism of PRAD progression and metastasis is still unclear. It's widely reported that more than 94% of genes are selectively splicing in humans and many isoforms are particularly related with cancer progression and metastasis. Spliceosome mutations occur in a mutually exclusive manner in breast cancer, and different components of spliceosomes are targets of somatic mutations in different types of breast cancer. Existing evidence strongly supports the key role of alternative splicing in breast cancer biology, and innovative tools are being developed to use splicing events for diagnostic and therapeutic purposes. In order to identify if the PRAD metastasis is associated with alternative splicing events (ASEs), the RNA sequencing data and ASEs data of 500 PRAD patients were retrieved from The Cancer Genome Atlas (TCGA) and TCGASpliceSeq databases. By Lasso regression, five genes were screened to construct the prediction model, with a good reliability by ROC curve. Additionally, results in both univariate and multivariate Cox regression analysis confirmed the well prognosis efficacy of the prediction model (both P < 0.001). Moreover, a potential splicing regulatory network was established and after multiple-database validation, we supposed that the signaling axis of HSPB1 up-regulating the PIP5K1C - 46,721 - AT (P < 0.001) might mediate the tumorigenesis, progression and metastasis of PRAD via the key members of Alzheimer's disease pathway (SRC, EGFR, MAPT, APP and PRKCA) (P < 0.001).

Indexed as

AdenocarcinomaBreast NeoplasmsProstatic NeoplasmsAlternative SplicingGene Regulatory NetworksHumansMalePrognosisProstateReproducibility of ResultsAlternative splicingBone metastasisPrognosisProstate adenocarcinomaSignaling pathwaySplicing factor

Identifiers

PMID37010714
PMCPMC10665256
OpenAlexW4362506394

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.