Evidence map›Paper›PMID 37008538›Full record

ArticleCurrent opinion in systems biology2020

Germline immunoglobulin genes: disease susceptibility genes hidden in plain sight?

Andrew M Collins, Gur Yaari, Adrian J Shepherd, William Lees, Corey T Watson

Open access · greenAbstract read
In one paragraph

Article in Current opinion in systems biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

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  8. Predictive genetic panel for adult asthma using machine learning methods.The journal of allergy and clinical immunology. Global · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Andrew M CollinsSchool of Biotechnology and Biomedical Sciences, University of New South Wales, Sydney, Australia.
Gur YaariBioengineering Program, Faculty of Engineering, Bar-Ilan University, Ramat Gan, Israel.
Adrian J ShepherdInstitute of Structural and Molecular Biology, Birkbeck College, University of London, London, United Kingdom.
William LeesInstitute of Structural and Molecular Biology, Birkbeck College, University of London, London, United Kingdom.
Corey T WatsonDepartment of Biochemistry and Molecular Genetics, School of Medicine, University of Louisville, KY, United States.
Institute of Structural and Molecular Biology · GBBar-Ilan University · ILUniversity of Louisville · USUNSW Sydney · AU

Funding

The role of ECM-mediated mechanosignaling on regional immunosuppression in GBMP20GM135004 · NIGMS · UNIVERSITY OF LOUISVILLE · PI Sharmila Nair · 2020 to 2026
$21.1M
An ethnically diverse genomic reference resource for the human heavy and light chain immunoglobulin lociR24AI138963 · NIAID · UNIVERSITY OF LOUISVILLE · PI Melissa Laird Smith, Corey Taylor Watson · 2018 to 2026
$5.5M
Population level characterization of human immunoglobulin heavy chain germline variants with impacts on variability in the Ab repertoire of healthy adultsR21AI142590 · NIAID · UNIVERSITY OF LOUISVILLE · PI MARASCO, WAYNE A., WATSON, COREY TAYLOR · 2019 to 2020
$477k
NIAID NIH HHS R21 AI142590NIAID NIH HHS R24 AI138963NIGMS NIH HHS P20 GM135004
6 · The paper itself

Abstract

Immunoglobulin genes are rarely considered as disease susceptibility genes despite their obvious and central contributions to immune function. This appears to be a consequence of historical views on antibody repertoire formation that no longer stand, and of difficulties that until recently surrounded the documentation of the suite of antibody genes in any individual. If these important genes are to be accessible to GWAS studies, allelic variation within the human population needs to be better documented, and a curated set of genomic variations associated with antibody genes needs to be formulated. Repertoire studies arising from the COVID-19 pandemic provide an opportunity to meet these needs, and may provide insights into the profound variability that is seen in outcomes to this infection.

Indexed as

AIRR-Seqantibody receptor repertoiresIGHVimmune receptor genesimmunoglobulinRep-Seq

Identifiers

PMID37008538
PMCPMC10062056
OpenAlexW3094103060

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.