Evidence map›Paper›PMID 37006675›Full record

ArticleChemical science2023

Heparan sulfate glycomimetics

Cangjie Yang, Yu Deng, Yang Wang, Chaoshuang Xia, Akul Y Mehta, Kelly J Baker, Anuj Samal, Putthipong Booneimsri, Chanthakarn Lertmaneedang, Seung Hwang and 8 more

Abstract read
In one paragraph

Article in Chemical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Cangjie YangDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Yu DengDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Yang WangDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Chaoshuang XiaCenter for Biomedical Mass Spectrometry, Boston University School of Medicine Boston MA 02118 USA.ORCID https://orcid.org/0000-0001-7076-4813
Akul Y MehtaDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School Brookline Ave Boston MA 02215 USA.
Kelly J BakerDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School Brookline Ave Boston MA 02215 USA.
Anuj SamalDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Putthipong BooneimsriDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Chanthakarn LertmaneedangDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Seung HwangDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
James P FlynnDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Muqing CaoDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Chao LiuDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Alec C ZhuDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Richard D CummingsDepartment of Surgery, Beth Israel Deaconess Medical Center, Harvard Medical School Brookline Ave Boston MA 02215 USA.
Cheng LinCenter for Biomedical Mass Spectrometry, Boston University School of Medicine Boston MA 02118 USA.
Udayan MohantyDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.
Jia NiuDepartment of Chemistry, Boston College Chestnut Hill Massachusetts 02467 USA udayan.mohanty@bc.edu jia.niu@bc.edu.ORCID https://orcid.org/0000-0002-5622-6362

Funding

Protein-Glycan Interaction Resource at the National Center for Functional Glycomics (NCFG)R24GM137763 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI RICHARD D CUMMINGS · 2020 to 2026
$5.8M
Development of Compact CRISPR Editors for Multiplexed Editing of Complex Gene NetworksDP2HG011027 · NHGRI · BOSTON COLLEGE · PI NIU, JIA · 2019 to 2020
$2.5M
High-Throughput De Novo Glycan SequencingR01GM132675 · NIGMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI HONG, PENGYU, LIN, CHENG · 2019 to 2022
$2.0M
CryoProbe-enabled Bruker AVANCE NEO 500 MHz NMR SpectrometerS10OD026910 · OD · BOSTON COLLEGE · PI JAYASUNDERA, THUSITHA · 2021 to 2021
$1000k
NHGRI NIH HHS DP2 HG011027NIGMS NIH HHS R01 GM132675NIGMS NIH HHS R24 GM137763NIH HHS S10 OD026910
6 · The paper itself

Abstract

Heparan sulfate (HS) glycosaminoglycans are widely expressed on the mammalian cell surfaces and extracellular matrices and play important roles in a variety of cell functions. Studies on the structure-activity relationships of HS have long been hampered by the challenges in obtaining chemically defined HS structures with unique sulfation patterns. Here, we report a new approach to HS glycomimetics based on iterative assembly of clickable disaccharide building blocks that mimic the disaccharide repeating units of native HS. Variably sulfated clickable disaccharides were facilely assembled into a library of mass spec-sequenceable HS-mimetic oligomers with defined sulfation patterns by solution-phase iterative syntheses. Microarray and surface plasmon resonance (SPR) binding assays corroborated molecular dynamics (MD) simulations and confirmed that these HS-mimetic oligomers bind protein fibroblast growth factor 2 (FGF2) in a sulfation-dependent manner consistent with that of the native HS. This work established a general approach to HS glycomimetics that can potentially serve as alternatives to native HS in both fundamental research and disease models.

Identifiers

PMID37006675
PMCPMC10055906

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.