Evidence map›Paper›PMID 37002698›Full record

ArticleMolecular oncology2023

Synthetic biology, genetic circuits and machine learning: a new age of cancer therapy.

Krishneel Prasad, Ryan S Cross, Misty R Jenkins

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review on Advancement of AI in Synthetic Biology.Methods in molecular biology (Clifton, N.J.) · 2025
    Review
  2. CAR-NKT Cells in Asthma: Use of NKT as a Promising Cell for CAR Therapy.Clinical reviews in allergy & immunology · 2024
    Review
  3. Biosecurity Risk Assessment for the Use of Artificial Intelligence in Synthetic Biology.Applied biosafety : journal of the American Biological Safety Association · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Krishneel PrasadImmunology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic., Australia.
Ryan S CrossImmunology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic., Australia.
Misty R JenkinsImmunology Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Vic., Australia.ORCID 0000-0001-6564-2715
Walter and Eliza Hall Institute of Medical Research · AUThe University of Melbourne · AU

Funding

NHMRC APP1172858
6 · The paper itself

Abstract

Synthetic biology has made it possible to rewire natural cellular responses to treat disease, notably demonstrated by chimeric antigen receptor (CAR) T cells as cancer immunotherapy. Building on the success of T-cell activation using synthetic receptors, the field is now investigating how induction of noncanonical signalling pathways and sophisticated synthetic gene circuitry can enhance the antitumour phenotype of engineered T cells. This commentary explores two recently published studies that provide proof of concept for how new technologies achieve this. The first demonstrated that non-naturally occurring combinations of signalling motifs derived from various immune receptors and arranged as a CAR drove unique signal transduction pathways in T cells and improved their tumour killing ability. Here, machine learning complemented the screening process and successfully predicted CAR T-cell phenotype dependent on signalling motif choice. The second explored how synthetic zinc fingers can be engineered into controllable transcriptional regulators, where their activity was dependent on the presence or absence of FDA-approved small-molecule drugs. These studies are pivotal in expanding the design choices available for gene circuits of the future and highlight how a single cellular therapy could respond to multiple environmental cues including target cell antigen expression, the tumour microenvironment composition and small molecule drugs.

Indexed as

Immunotherapy, AdoptiveMachine LearningNeoplasmsReceptors, Chimeric AntigenGene Regulatory NetworksHumansSynthetic BiologyReceptors, Chimeric Antigenchimeric antigen receptor T cellsgene circuitsimmunotherapysignallingsynthetic biology

Identifiers

PMID37002698
PMCPMC10257410
OpenAlexW4362455282

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.