Evidence map›Paper›PMID 37002678›Full record

ArticleCPT: pharmacometrics & systems pharmacology2023

A decision support system based on artificial intelligence and systems biology for the simulation of pancreatic cancer patient status.

Valentin Junet, Pedro Matos-Filipe, Juan Manuel García-Illarramendi, Esther Ramírez, Baldo Oliva, Judith Farrés, Xavier Daura, José Manuel Mas, Rafael Morales

Abstract read
In one paragraph

Article in CPT: pharmacometrics & systems pharmacology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Valentin JunetAnaxomics Biotech SL, Barcelona, Spain.ORCID 0000-0002-6138-0612
Pedro Matos-FilipeAnaxomics Biotech SL, Barcelona, Spain.ORCID 0000-0003-0492-0683
Juan Manuel García-IllarramendiAnaxomics Biotech SL, Barcelona, Spain.ORCID 0000-0003-3368-814X
Esther RamírezIteraset Solutions SL, Barcelona, Spain.
Baldo OlivaStructural Bioinformatics (GRIB-IMIM), Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, Barcelona, Spain.ORCID 0000-0003-0702-0250
Judith FarrésAnaxomics Biotech SL, Barcelona, Spain.ORCID 0000-0002-0958-0510
Xavier DauraInstitute of Biotechnology and Biomedicine, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain.ORCID 0000-0001-9235-6730
José Manuel MasAnaxomics Biotech SL, Barcelona, Spain.
Rafael MoralesHospital La Mancha Centro, Alcázar de San Juan, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oncology treatments require continuous individual adjustment based on the measurement of multiple clinical parameters. Prediction tools exploiting the patterns present in the clinical data could be used to assist decision making and ease the burden associated to the interpretation of all these parameters. The goal of this study was to predict the evolution of patients with pancreatic cancer at their next visit using information routinely recorded in health records, providing a decision-support system for clinicians. We selected hematological variables as the visit's clinical outcomes, under the assumption that they can be predictive of the evolution of the patient. Multivariate models based on regression trees were generated to predict next-visit values for each of the clinical outcomes selected, based on the longitudinal clinical data as well as on molecular data sets streaming from in silico simulations of individual patient status at each visit. The models predict, with a mean prediction score (balanced accuracy) of 0.79, the evolution trends of eosinophils, leukocytes, monocytes, and platelets. Time span between visits and neutropenia were among the most common factors contributing to the predicted evolution. The inclusion of molecular variables from the systems-biology in silico simulations provided a molecular background for the observed variations in the selected outcome variables, mostly in relation to the regulation of hematopoiesis. In spite of its limitations, this study serves as a proof of concept for the application of next-visit prediction tools in real-world settings, even when available data sets are small.

Indexed as

Artificial IntelligencePancreatic NeoplasmsComputer SimulationHumansSystems Biology

Identifiers

PMID37002678
PMCPMC10349189

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.