Evidence map›Paper›PMID 37000274›Full record

ArticleCurrent microbiology2023

Tentative Epidemiological Cut-Off Values and Distribution of Resistance Genes in Aquatic Pseudomonas Species Isolated from Rainbow Trout.

Muhammed Duman, Soo-Ji Woo, Soner Altun, Izzet Burçin Satıcıoğlu

Abstract read
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In one paragraph

Article in Current microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Muhammed DumanDepartment of Aquatic Animal Disease, Faculty of Veterinary Medicine, Bursa Uludag University, 16059, Bursa, Turkey.ORCID http://orcid.org/0000-0001-7707-2705
Soo-Ji WooAquaculture Industry Research Division, East Sea Fisheries Research Institute, National Institute of Fisheries Science, Gangneung, 25435, Korea. wsj2215@naver.com.ORCID http://orcid.org/0000-0001-5337-6042
Soner AltunDepartment of Aquatic Animal Disease, Faculty of Veterinary Medicine, Bursa Uludag University, 16059, Bursa, Turkey.ORCID http://orcid.org/0000-0001-9096-875X
Izzet Burçin SatıcıoğluDepartment of Aquatic Animal Disease, Faculty of Veterinary Medicine, Bursa Uludag University, 16059, Bursa, Turkey.ORCID http://orcid.org/0000-0002-2721-3204
Bursa Uludağ Üni̇versi̇tesi̇ · TRJapan Fisheries Research and Education Agency · JP

Funding

Scientific and Technological Research Council of Turkey 118O420
6 · The paper itself

Abstract

Epidemiological cut-off value (ECV) analysis for commonly used antimicrobials in aquaculture have not been established for many aquatic pathogens, including Pseudomonas. This study was the first to examine the categorization of 92 aquatic Pseudomonas isolates by calculating seven antimicrobials ECVs using two analytical methods: normalized resistance interpretation and ECOFFinder. Pseudomonas spp. isolates had decreased sensitivity to all antimicrobials examined except for doxycycline and ciprofloxacin. The PCR analysis of the 91 isolates of Pseudomonas spp. detected the tetracycline genes are predominant with the count of 41 genes, including tetA, tetC, tetD, tetM, tetS and tetH, following sulfonamide genes are in 21 isolates including sul1 and sul2, floR gene in 15 isolates and ermA gene in three isolates. Our findings provide an understanding of the antimicrobial categorization of Pseudomonas species, which are significant groups, subgroups, and species for aquaculture due to insufficiently defined breakpoints or cut-off values reported in CLSI and/or EUCAST.

Indexed as

Oncorhynchus mykissAnimalsAnti-Bacterial AgentsMicrobial Sensitivity TestsPseudomonasTetracyclineAnti-Bacterial AgentsTetracycline

Identifiers

PMID37000274
OpenAlexW4362475656

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.