Evidence map›Paper›PMID 37000005›Full record

ArticleHuman molecular genetics2023

SOX7 deficiency causes ventricular septal defects through its effects on endocardial-to-mesenchymal transition and the expression of Wnt4 and Bmp2.

Andrés Hernández-García, Katherine E Pendleton, Sangbae Kim, Yumei Li, Bum J Kim, Hitisha P Zaveri, Valerie K Jordan, Aliska M Berry, M Cecilia Ljungberg, Rui Chen and 2 more

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Andrés Hernández-GarcíaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Katherine E PendletonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Sangbae KimDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Yumei LiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Bum J KimDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Hitisha P ZaveriDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Valerie K JordanDepartment of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, TX 77030, USA.
Aliska M BerryDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
M Cecilia LjungbergDepartment of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Rui ChenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Rainer B LanzDepartment of Molecular & Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Daryl A ScottDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Baylor College of Medicine · USNeurological Research Institute · USQuantitative BioSciences · US

Funding

Preclinical and Clincial OutcomesP50HD103555 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI Sandesh Chakravarthy Sreenath Nagamani, David Loren Nelson · 2020 to 2026
$9.9M
Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
Genetics & Genomics Training ProgramT32GM139534 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI GAD SHAULSKY · 2021 to 2026
$4.8M
Mechanisms of Abnormal Diaphragm and Cardiac DevelopmentR01HD098458 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI Daryl Armstrong Scott · 2020 to 2026
$2.8M
High Throughput Genomic Sequencer at BCM Core FacilityS10OD023469 · OD · BAYLOR COLLEGE OF MEDICINE · PI CHEN, RUI · 2017 to 2017
$600k
Identification and Characterization of Genes in Congenital Diaphragmatic HerniaF30HL099469 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI WAT, MARGARET J · 2010 to 2013
$155k
NHLBI NIH HHS F30 HL099469NICHD NIH HHS P50 HD103555NICHD NIH HHS R01 HD098458NICHD NIH HHS U54 HD083092NIGMS NIH HHS T32 GM139534NIH HHS S10 OD023469
6 · The paper itself

Abstract

SOX7 is a transcription factor-encoding gene located in a region on chromosome 8p23.1 that is recurrently deleted in individuals with ventricular septal defects (VSDs). We have previously shown that Sox7-/- embryos die of heart failure around E11.5. Here, we demonstrate that these embryos have hypocellular endocardial cushions with severely reduced numbers of mesenchymal cells. Ablation of Sox7 in the endocardium also resulted in hypocellular endocardial cushions, and we observed VSDs in rare E15.5 Sox7flox/-;Tie2-Cre and Sox7flox/flox;Tie2-Cre embryos that survived to E15.5. In atrioventricular explant studies, we showed that SOX7 deficiency leads to a severe reduction in endocardial-to-mesenchymal transition (EndMT). RNA-seq studies performed on E9.5 Sox7-/- heart tubes revealed severely reduced Wnt4 transcript levels. Wnt4 is expressed in the endocardium and promotes EndMT by acting in a paracrine manner to increase the expression of Bmp2 in the myocardium. Both WNT4 and BMP2 have been previously implicated in the development of VSDs in individuals with 46,XX sex reversal with dysgenesis of kidney, adrenals and lungs (SERKAL) syndrome and in individuals with short stature, facial dysmorphism and skeletal anomalies with or without cardiac anomalies 1 (SSFSC1) syndrome, respectively. We now show that Sox7 and Wnt4 interact genetically in the development of VSDs through their additive effects on endocardial cushion development with Sox7+/-;Wnt4+/- double heterozygous embryos having hypocellular endocardial cushions and perimembranous and muscular VSDs not seen in their Sox7+/- and Wnt4+/- littermates. These results provide additional evidence that SOX7, WNT4 and BMP2 function in the same pathway during mammalian septal development and that their deficiency can contribute to the development of VSDs in humans.

Indexed as

Heart Defects, CongenitalHeart Septal Defects, VentricularAnimalsEndocardiumHeartMiceMyocardiumSOXF Transcription FactorsSOXF Transcription Factors

Identifiers

PMID37000005
PMCPMC10281751
OpenAlexW4362038805

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.