Evidence map›Paper›PMID 36998012›Full record

ArticleVirology journal2023

SARS-CoV-2 viral protein Nsp2 stimulates translation under normal and hypoxic conditions.

Nadejda Korneeva, Md Imtiaz Khalil, Ishita Ghosh, Ruping Fan, Thomas Arnold, Arrigo De Benedetti

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Nadejda KorneevaDepartment of Emergency Medicine, Louisiana State University Health, Shreveport, LA, 71103, USA.
Md Imtiaz KhalilDepartment of Biochemistry and Molecular Biology, Louisiana State University Health, Shreveport, LA, 71103, USA.
Ishita GhoshDepartment of Biochemistry and Molecular Biology, Louisiana State University Health, Shreveport, LA, 71103, USA.
Ruping FanDepartment of Emergency Medicine, Louisiana State University Health, Shreveport, LA, 71103, USA.
Thomas ArnoldDepartment of Emergency Medicine, Louisiana State University Health, Shreveport, LA, 71103, USA.
Arrigo De BenedettiDepartment of Biochemistry and Molecular Biology, Louisiana State University Health, Shreveport, LA, 71103, USA. arrigo.debenedetti@lsuhs.edu.
Louisiana State University · USLouisiana State University in Shreveport · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

When viruses like SARS-CoV-2 infect cells, they reprogram the repertoire of cellular and viral transcripts that are being translated to optimize their strategy of replication, often targeting host translation initiation factors, particularly eIF4F complex consisting of eIF4E, eIF4G and eIF4A. A proteomic analysis of SARS-CoV-2/human proteins interaction revealed viral Nsp2 and initiation factor eIF4E2, but a role of Nsp2 in regulating translation is still controversial. HEK293T cells stably expressing Nsp2 were tested for protein synthesis rates of synthetic and endogenous mRNAs known to be translated via cap- or IRES-dependent mechanism under normal and hypoxic conditions. Both cap- and IRES-dependent translation were increased in Nsp2-expressing cells under normal and hypoxic conditions, especially mRNAs that require high levels of eIF4F. This could be exploited by the virus to maintain high translation rates of both viral and cellular proteins, particularly in hypoxic conditions as may arise in SARS-CoV-2 patients with poor lung functioning.

Indexed as

COVID-19Protein BiosynthesisSARS-CoV-2Viral Nonstructural ProteinsEukaryotic Initiation Factor-4EHEK293 CellsHumansPeptide Chain Initiation, TranslationalEIF4E2 protein, humanEukaryotic Initiation Factor-4EORF1ab polyprotein, SARS-CoV-2Viral Nonstructural ProteinsCoronavirusCovid-19eIF4E2eIF4FHypoxiaNsp2SARS-CoV-2Translation

Identifiers

PMID36998012
PMCPMC10060939
OpenAlexW4361280892

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.