Evidence map›Paper›PMID 36997737›Full record

ArticleNature ecology & evolution2023

Multiple intermolecular interactions facilitate rapid evolution of essential genes.

Huei-Yi Lai, Yen-Hsin Yu, Yu-Ting Jhou, Chia-Wei Liao, Jun-Yi Leu

Open access · hybridAbstract read
In one paragraph

Article in Nature ecology & evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Journal of fungi (Basel, Switzerland) · 2026
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  6. A newborn F-box gene blocks gene flow by selectively degrading phosphoglucomutase in species hybrids.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Huei-Yi LaiInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Yen-Hsin YuInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Yu-Ting JhouInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.
Chia-Wei LiaoInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-5256-3839
Jun-Yi LeuInstitute of Molecular Biology, Academia Sinica, Taipei, Taiwan. jleu@imb.sinica.edu.tw.ORCID 0000-0001-5445-2799
Institute of Molecular Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Essential genes are commonly assumed to function in basic cellular processes and to change slowly. However, it remains unclear whether all essential genes are similarly conserved or if their evolutionary rates can be accelerated by specific factors. To address these questions, we replaced 86 essential genes of Saccharomyces cerevisiae with orthologues from four other species that diverged from S. cerevisiae about 50, 100, 270 and 420 Myr ago. We identify a group of fast-evolving genes that often encode subunits of large protein complexes, including anaphase-promoting complex/cyclosome (APC/C). Incompatibility of fast-evolving genes is rescued by simultaneously replacing interacting components, suggesting it is caused by protein co-evolution. Detailed investigation of APC/C further revealed that co-evolution involves not only primary interacting proteins but also secondary ones, suggesting the evolutionary impact of epistasis. Multiple intermolecular interactions in protein complexes may provide a microenvironment facilitating rapid evolution of their subunits.

Indexed as

Saccharomyces cerevisiae ProteinsUbiquitin-Protein LigasesAnaphase-Promoting Complex-CyclosomeCell Cycle ProteinsGenes, EssentialSaccharomyces cerevisiaeAnaphase-Promoting Complex-CyclosomeCell Cycle ProteinsSaccharomyces cerevisiae ProteinsUbiquitin-Protein Ligases

Identifiers

PMID36997737
PMCPMC10172115
OpenAlexW4362459663

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.