Evidence map›Paper›PMID 36996230›Full record

ArticleScience (New York, N.Y.)2023

Brassinosteroid gene regulatory networks at cellular resolution in the

Trevor M Nolan, Nemanja Vukašinović, Che-Wei Hsu, Jingyuan Zhang, Isabelle Vanhoutte, Rachel Shahan, Isaiah W Taylor, Laura Greenstreet, Matthieu Heitz, Anton Afanassiev and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
59.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 148 citations in OpenAlex.

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  19. Review
  20. Single-Cell/Nucleus RNA-Sequencing for Phytohormone Signaling in Plants.Methods in molecular biology (Clifton, N.J.) · 2026
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 4 countries.

Trevor M Nolan *Department of Biology, Duke University, Durham, NC, USA.ORCID 0000-0003-1362-2557
Nemanja Vukašinović *Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.ORCID 0000-0003-2740-7874
Che-Wei Hsu *Department of Biology, Duke University, Durham, NC, USA.ORCID 0000-0003-3709-9748
Jingyuan ZhangDepartment of Biology, Duke University, Durham, NC, USA.
Isabelle VanhoutteDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.ORCID 0000-0003-2878-134X
Rachel ShahanDepartment of Biology, Duke University, Durham, NC, USA.ORCID 0000-0001-7702-9432
Isaiah W TaylorDepartment of Biology, Duke University, Durham, NC, USA.ORCID 0000-0002-6535-8658
Laura GreenstreetDepartment of Mathematics, University of British Columbia, Vancouver, BC, Canada.ORCID 0000-0003-0635-3870
Matthieu HeitzDepartment of Mathematics, University of British Columbia, Vancouver, BC, Canada.ORCID 0000-0003-1552-1688
Anton AfanassievDepartment of Mathematics, University of British Columbia, Vancouver, BC, Canada.
Ping WangDepartment of Genetics, Development, and Cell Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0002-4484-6329
Pablo SzekelyDepartment of Biology, Duke University, Durham, NC, USA.ORCID 0000-0002-1569-4151
Aiden BrosnanDepartment of Biology, Duke University, Durham, NC, USA.ORCID 0000-0002-9979-4060
Yanhai YinDepartment of Genetics, Development, and Cell Biology, Iowa State University, Ames, IA, USA.ORCID 0000-0002-3044-9701
Geoffrey SchiebingerDepartment of Mathematics, University of British Columbia, Vancouver, BC, Canada.
Uwe OhlerDepartment of Biology, Humboldt Universitat zu Berlin, Berlin, Germany.ORCID 0000-0002-0881-3116
Eugenia RussinovaDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.ORCID 0000-0002-0569-1977
Philip N BenfeyDepartment of Biology, Duke University, Durham, NC, USA.ORCID 0000-0001-5302-758X
Duke University · USUniversity of British Columbia · CAGhent University · BEHoward Hughes Medical Institute · USIowa State University · US

Funding

A Molecular Genetic Analysis of Root MorphogenesisR35GM131725 · NIGMS · DUKE UNIVERSITY · PI BENFEY, PHILIP N · 2019 to 2023
$1.5M
Architecture and Dynamics of a Gene Regulatory Network Controlling Cell FateF32GM136030 · NIGMS · DUKE UNIVERSITY · PI SHAHAN, RACHEL MACZIS · 2020 to 2021
$131k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM136030NIGMS NIH HHS R35 GM131725
6 · The paper itself

Abstract

Brassinosteroids are plant steroid hormones that regulate diverse processes, such as cell division and cell elongation, through gene regulatory networks that vary in space and time. By using time series single-cell RNA sequencing to profile brassinosteroid-responsive gene expression specific to different cell types and developmental stages of the

Indexed as

ArabidopsisArabidopsis ProteinsBrassinosteroidsCell DifferentiationCell DivisionGene Expression Regulation, PlantGene Regulatory NetworksPlant Growth RegulatorsPlant RootsHomeodomain ProteinsTranscription FactorsArabidopsis ProteinsBrassinosteroidsHomeodomain ProteinsPlant Growth RegulatorsTranscription Factors

Identifiers

PMID36996230
PMCPMC10119888
OpenAlexW4362507269

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.