Evidence map›Paper›PMID 36993458›Full record

ArticlebioRxiv : the preprint server for biology2023

Transcript Isoform Diversity of Ampliconic Genes on the Y Chromosome of Great Apes.

Marta Tomaszkiewicz, Kristoffer Sahlin, Paul Medvedev, Kateryna D Makova

Open access · greenAbstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Marta TomaszkiewiczDepartment of Biomedical Engineering, The Pennsylvania State University, University Park, PA 16802, USA.
Kristoffer SahlinDepartment of Mathematics, Science for Life Laboratory, Stockholm University, 106 91, Stockholm, Sweden.
Paul MedvedevDepartment of Computer Science and Engineering, The Pennsylvania State University.
Kateryna D MakovaCenter for Medical Genomics, The Pennsylvania State University, University Park, PA 16802, USA.
Pennsylvania State University · USStockholm University · SE

Funding

Leveraging k-mer sketching statistics to enhance metagenomic methods and alignment algorithmsR01GM146462 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI Antonio Blanca Pimentel, David Koslicki · 2022 to 2026
$2.2M
Y Chromosome EvolutionR01GM130691 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI MAKOVA, KATERYNA · 2019 to 2022
$1.7M
NIGMS NIH HHS R01 GM130691NIGMS NIH HHS R01 GM146462
6 · The paper itself

Abstract

Y-chromosomal Ampliconic Genes (YAGs) are important for male fertility, as they encode proteins functioning in spermatogenesis. The variation in copy number and expression levels of these multicopy gene families has been recently studied in great apes, however, the diversity of splicing variants remains unexplored. Here we deciphered the sequences of polyadenylated transcripts of all nine YAG families (

Identifiers

PMID36993458
PMCPMC10054944
OpenAlexW4323364614

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.