Evidence map›Paper›PMID 36992918›Full record

ArticleJournal of biological methods2022

SpheroidAnalyseR-an online platform for analyzing data from 3D spheroids or organoids grown in 96-well plates.

Rhiannon Barrow, Joseph N Wilkinson, Yichen He, Martin Callaghan, Anke Brüning-Richardson, Mark Dunning, Lucy F Stead

Abstract read
In one paragraph

Article in Journal of biological methods, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rhiannon BarrowLeeds Institute of Medical Research at St James's, Wellcome Trust Brenner Building, St James's University Hospital, Leeds LS9 7TF, West Yorkshire, UK.
Joseph N WilkinsonLeeds Institute of Medical Research at St James's, Wellcome Trust Brenner Building, St James's University Hospital, Leeds LS9 7TF, West Yorkshire, UK.
Yichen HeDepartment of Animal and Plant Sciences, Alfred Denny Building, The University of Sheffield, Western Bank, Sheffield S10 2TN, UK.
Martin CallaghanResearch Software Engineer Group, IT Services, University of Leeds, Leeds LS2 9JT, UK.
Anke Brüning-RichardsonThe University of Huddersfield School of Applied Sciences, Queensgate, Huddersfield HD1 3DH, West Yorkshire, UK.
Mark DunningBioinformatics Core, The University of Sheffield Medical School, Beech Hill Road, Sheffield S10 2RX, UK.
Lucy F SteadLeeds Institute of Medical Research at St James's, Wellcome Trust Brenner Building, St James's University Hospital, Leeds LS9 7TF, West Yorkshire, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spheroids and organoids are increasingly popular three-dimensional (3D) cell culture models. Spheroid models are more physiologically relevant to a tumor compared to two-dimensional (2D) cultures and organoids are a simplified version of an organ with similar composition. Spheroids are often only formed from a single cell type which does not represent the situation

Indexed as

confocalorganoidsR Shinyspheroids

Identifiers

PMID36992918
PMCPMC10040300

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.