Evidence map›Paper›PMID 36992503›Full record

ArticleViruses2023

Tissue and Time Optimization for Real-Time Detection of Apple Mosaic Virus and Apple Necrotic Mosaic Virus Associated with Mosaic Disease of Apple (

Sajad Un Nabi, Javid Iqbal Mir, Salwee Yasmin, Ambreena Din, Wasim H Raja, G S Madhu, Shugufta Parveen, Sheikh Mansoor, Yong Suk Chung, Om Chand Sharma and 3 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
4.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Sajad Un NabiICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Javid Iqbal MirICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Salwee YasminICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Ambreena DinICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Wasim H RajaICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
G S MadhuICAR-Indian Institute of Horticultural Research, RS-Chettalli, Bangaluru 571248, Karnataka, India.
Shugufta ParveenICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Sheikh MansoorDepartment of Plant Resources and Environment, Jeju National University, Jeju-si 63243, Republic of Korea.ORCID 0000-0003-1902-4611
Yong Suk ChungDepartment of Plant Resources and Environment, Jeju National University, Jeju-si 63243, Republic of Korea.
Om Chand SharmaICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Muneer Ahmad SheikhICAR-Central Institute of Temperate Horticulture, Srinagar 191132, Jammu & Kashmir, India.
Fahad A Al-MisnedDepartment of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia.
Hamed A El-SerehyDepartment of Zoology, College of Science, King Saud University, Riyadh 11451, Saudi Arabia.ORCID 0000-0002-7686-0010
Central Institute of Temperate Horticulture · INJeju National University · KRKing Saud University · SAIndian Institute of Horticultural Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Besides apple mosaic virus (ApMV), apple necrotic mosaic virus (ApNMV) has also been found to be associated with apple mosaic disease. Both viruses are unevenly distributed throughout the plant and their titer decreases variably with high temperatures, hence requiring proper tissue and time for early and real-time detection within plants. The present study was carried out to understand the distribution and titer of ApMV and ApNMV in apple trees from different plant parts (spatial) during different seasons (temporal) for the optimization of tissue and time for their timely detection. The Reverse Transcription-Polymerase Chain Reaction (RT-PCR) and Reverse Transcription-quantitative Polymerase Chain Reaction (RT-qPCR) was carried out to detect and quantify both viruses in the various plant parts of apple trees during different seasons. Depending on the availability of tissue, both ApMV and ApNMV were detected in all the plant parts during the spring season using RT-PCR. During the summer, both viruses were detected only in seeds and fruits, whereas they were detected in leaves and pedicel during the autumn season. The RT-qPCR results showed that during the spring, the ApMV and ApNMV expression was higher in leaves, whereas in the summer and autumn, the titer was mostly detected in seeds and leaves, respectively. The leaves in the spring and autumn seasons and the seeds in the summer season can be used as detection tissues through RT-PCR for early and rapid detection of ApMV and ApNMV. This study was validated on 7 cultivars of apples infected with both viruses. This will help to accurately sample and index the planting material well ahead of time, which will aid in the production of virus-free, quality planting material.

Indexed as

IlarvirusMalusMosaic VirusesPlant VirusesPlant DiseasesPlantsappledetectionexpressionmosaicspatialtemporalvirus

Identifiers

PMID36992503
PMCPMC10059951
OpenAlexW4328126945

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.