Evidence map›Paper›PMID 36988717›Full record

ArticleMikrochimica acta2023

Detection of SARS-CoV-2 receptor binding domain using fluorescence probe and DNA flowers enabled by rolling circle amplification.

Man Zhang, Lei Ye

Abstract read
In one paragraph

Article in Mikrochimica acta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Man ZhangDivision of Pure and Applied Biochemistry, Department of Chemistry, Lund University, Box124, 22100, Lund, Sweden.
Lei YeDivision of Pure and Applied Biochemistry, Department of Chemistry, Lund University, Box124, 22100, Lund, Sweden. Lei.Ye@tbiokem.lth.se.ORCID http://orcid.org/0000-0002-3646-4072

Funding

Vetenskapsrådet 2019-04228
6 · The paper itself

Abstract

Using rolling circle amplification (RCA) and two different ways of signal readout, we developed analytical methods to detect the receptor-binding domain (RBD) of SARS-CoV-2 spike protein (S protein). We modified streptavidin-coated magnetic beads with an aptamer of RBD through a biotin-tagged complementary DNA strand (biotin-cDNA). Binding of RBD caused the aptamer to dissociate from the biotin-cDNA, making the cDNA available to initiate RCA on the magnetic beads. Detection of RBD was achieved using a dual signal output. For fluorescence signaling, the RCA products were mixed with a dsDNA probe labeled with fluorophore and quencher. Hybridization of the RCA products caused the dsDNA to separate and to emit fluorescence (λ

Indexed as

COVID-19Fluorescent DyesBiotinDNADNA, ComplementaryHorseradish PeroxidaseHumansHydrogen PeroxideSARS-CoV-2Spike Glycoprotein, CoronavirusBiotinDNADNA, ComplementaryFluorescent DyesHorseradish PeroxidaseHydrogen PeroxideSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Colorimetric detectionDNA flowerFluorescence signalRolling circle amplificationSARS-CoV-2 spike protein

Identifiers

PMID36988717
PMCPMC10052277

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.