Evidence map›Paper›PMID 36982156›Full record

ArticleInternational journal of molecular sciences2023

Lipids in Mitochondrial Macroautophagy: Phase Behavior of Bilayers Containing Cardiolipin and Ceramide.

Yaiza R Varela, Emilio J González-Ramírez, Marina N Iriondo, Uxue Ballesteros, Asier Etxaniz, Lidia Ruth Montes, Félix M Goñi, Alicia Alonso

Open access · goldFull text read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Effects of aInternational journal of molecular sciences · 2023
    Article
  4. Biophysics in Membrane of Cells.International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yaiza R VarelaInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.
Emilio J González-RamírezInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0002-2839-7420
Marina N IriondoInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0002-3816-0865
Uxue BallesterosInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0001-8166-6485
Asier EtxanizInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0003-2916-8256
Lidia Ruth MontesInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0002-4766-8417
Félix M GoñiInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0001-6270-9216
Alicia AlonsoInstituto Biofisika (UPV/EHU, CSIC), and Department of Biochemistry and Molecular Biology, University of the Basque Country, E-48940 Leioa, Spain.ORCID 0000-0002-2730-7470
University of the Basque Country · ES

Funding

Basque Government IT1625-22Fundación Ramón Areces CIVP20A6619Spanish Ministry of Science, Innovation and Universities PID2021-124461NB-I00
6 · The paper itself

Abstract

Cardiolipin (CL) is a key lipid for damaged mitochondrial recognition by the LC3/GABARAP human autophagy proteins. The role of ceramide (Cer) in this process is unclear, but CL and Cer have been proposed to coexist in mitochondria under certain conditions. Varela et al. showed that in model membranes composed of egg sphingomyelin (eSM), dioleoyl phosphatidylethanolamine (DOPE), and CL, the addition of Cer enhanced the binding of LC3/GABARAP proteins to bilayers. Cer gave rise to lateral phase separation of Cer-rich rigid domains but protein binding took place mainly in the fluid continuous phase. In the present study, a biophysical analysis of bilayers composed of eSM, DOPE, CL, and/or Cer was attempted to understand the relevance of this lipid coexistence. Bilayers were studied by differential scanning calorimetry, confocal fluorescence microscopy, and atomic force microscopy. Upon the addition of CL and Cer, one continuous phase and two segregated ones were formed. In bilayers with egg phosphatidylcholine instead of eSM, in which the binding of LC3/GABARAP proteins hardly increased with Cer in the former study, a single segregated phase was formed. Assuming that phase separation at the nanoscale is ruled by the same principles acting at the micrometer scale, it is proposed that Cer-enriched rigid nanodomains, stabilized by eSM:Cer interactions formed within the DOPE- and CL-enriched fluid phase, result in structural defects at the rigid/fluid nanointerfaces, thus hypothetically facilitatingLC3/GABARAP protein interaction.

Indexed as

CardiolipinsCeramidesHumansLipid BilayersMacroautophagyMitochondriaSphingomyelinsCardiolipinsCeramidesLipid BilayersSphingomyelinsautophagycardiolipinceramideLC3/GABARAPnanodomains

Identifiers

PMID36982156
PMCPMC10049649
OpenAlexW4323365068

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read31
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.