Evidence map›Paper›PMID 36980598›Full record

ArticleCancers2023

The Driverless Triple-Wild-Type (BRAF, RAS, KIT) Cutaneous Melanoma: Whole Genome Sequencing Discoveries.

Orsolya Pipek, Laura Vizkeleti, Viktória Doma, Donát Alpár, Csaba Bödör, Sarolta Kárpáti, Jozsef Timar

Open access · goldFull text read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Functional characterization of the 9q34.13 locus identifiesbioRxiv : the preprint server for biology · 2026
    Article
  6. Article
  7. Mapping of the hSOX10 protein interactome in human melanoma.bioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. ATRX Loss in the Development and Prognosis of Conjunctival Melanoma.International journal of molecular sciences · 2023
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Orsolya PipekDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, 1053 Budapest, Hungary.ORCID 0000-0001-8109-0340
Laura VizkeletiDepartment of Pathology, Forensic and Insurance Medicine, Semmelweis University, 1085 Budapest, Hungary.ORCID 0000-0001-6870-3499
Viktória DomaDepartment of Dermatology, Venerology and Dermatooncology, Semmelweis University, 1085 Budapest, Hungary.
Donát AlpárDepartment of Pathology and Experimental Cancer Research, Semmelweis University, 1085 Budapest, Hungary.ORCID 0000-0002-2638-5418
Csaba BödörDepartment of Pathology and Experimental Cancer Research, Semmelweis University, 1085 Budapest, Hungary.
Sarolta KárpátiDepartment of Dermatology, Venerology and Dermatooncology, Semmelweis University, 1085 Budapest, Hungary.
Jozsef TimarDepartment of Pathology, Forensic and Insurance Medicine, Semmelweis University, 1085 Budapest, Hungary.
Semmelweis University · HUEötvös Loránd University · HU

Funding

National Research, Development and Innovation Office K-135540National Research, Development and Innovation Office NVKP-16-1-2016-4National Research, Development and Innovation Office TKP21-EGA25
6 · The paper itself

Abstract

The genetic makeup of the triple-wild-type melanoma (BRAF, NRAS and NF1) has been known for some time, but those studies grouped together rare histopathological versions with common ones, as well as mucosal and even uveal ones. Here we used whole genome sequencing to genetically characterize the triple-wild-type melanoma (TWM), termed here as BRAF, RAS and KIT wild type (the most frequent oncogenic drivers of skin melanoma), using the most common histological forms and excluding rare ones. All these tumors except one were clearly induced by UV based on the mutational signature. The tumor mutational burden was low in TWM, except in the NF1 mutant forms, and a relatively high frequency of elevated LOH scores suggested frequent homologue recombination deficiency, but this was only confirmed by the mutation signature in one case. Furthermore, all these TWMs were microsatellite-stabile. In this driverless setting, we revealed rare oncogenic drivers known from melanoma or other cancer types and identified rare actionable tyrosine kinase mutations in NTRK1, RET and VEGFR1. Mutations of TWM identified genes involved in antitumor immunity (negative and positive predictors of immunotherapy), Ca

Indexed as

BRAF, RAS, KIT wild typeskin melanomawhole genome sequencing

Identifiers

PMID36980598
PMCPMC10046270
OpenAlexW4324092569

What OpenQuestion holds

Textfull text, public
LicenceCC BY
measurements read13
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.